Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS10145

Experiment: Carbon source Phenylacetic 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Phenylacetic 5 mM
2,289,087	-		HSERO_RS10140	0.21	+0.4
2,289,098	+		HSERO_RS10140	0.22	+0.7
2,289,098	+		HSERO_RS10140	0.22	+0.7
2,289,098	+		HSERO_RS10140	0.22	+0.5
2,289,106	-		HSERO_RS10140	0.22	+0.8
2,289,106	-				-0.9
2,289,106	-		HSERO_RS10140	0.22	+1.1
2,289,106	-		HSERO_RS10140	0.22	+1.0
2,289,151	-				-0.3
2,289,205	-		HSERO_RS10140	0.31	+0.4
2,289,279	+		HSERO_RS10140	0.37	+1.1
2,289,291	+		HSERO_RS10140	0.38	+0.9
2,289,785	-				-0.9
2,289,868	+		HSERO_RS10140	0.87	+0.2
2,290,007	-				+0.3
2,290,007	-				-1.1
2,290,081	-				+0.1
2,290,113	-				+2.1
2,290,213	-				+1.0
2,290,216	-				+0.8
2,290,264	-		HSERO_RS10145	0.12	+1.4
2,290,305	-		HSERO_RS10145	0.13	+0.9
2,290,318	-		HSERO_RS10145	0.14	+1.0
2,290,367	+		HSERO_RS10145	0.16	+1.2
2,290,404	-		HSERO_RS10145	0.18	+0.8
2,290,695	-		HSERO_RS10145	0.32	+0.8
2,291,026	-		HSERO_RS10145	0.47	+0.4
2,291,113	+				+0.7
2,291,212	-		HSERO_RS10145	0.56	+0.7
2,291,349	+		HSERO_RS10145	0.63	+0.5
2,291,472	+		HSERO_RS10145	0.69	+0.4
2,291,517	+		HSERO_RS10145	0.71	+1.1
2,291,579	-		HSERO_RS10145	0.74	+0.7
2,291,721	-		HSERO_RS10145	0.80	+1.6
2,291,772	-		HSERO_RS10145	0.83	+0.7
2,291,999	+				+0.5
2,292,415	-		HSERO_RS10150	0.19	+0.8
2,292,550	-		HSERO_RS10150	0.28	+0.4
2,292,601	-		HSERO_RS10150	0.31	+0.6
2,292,756	-		HSERO_RS10150	0.42	+0.4
2,292,859	-		HSERO_RS10150	0.49	+0.8