Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS09940

Experiment: Carbon source Phenylacetic 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Phenylacetic 5 mM
2,246,101	+		HSERO_RS09935	0.59	-0.3
2,246,119	+		HSERO_RS09935	0.60	+0.0
2,246,473	+		HSERO_RS09935	0.86	-0.4
2,246,610	-				-0.4
2,246,696	-				-0.4
2,246,852	-				-0.2
2,246,852	-				-0.2
2,246,852	-				+0.3
2,246,862	-				-0.6
2,247,082	-		HSERO_RS09940	0.34	+0.3
2,247,144	-		HSERO_RS09940	0.42	+0.3
2,247,144	-				-0.3
2,247,144	-		HSERO_RS09940	0.42	+1.3
2,247,484	-				-0.9
2,247,896	+		HSERO_RS09945	0.23	-1.1
2,247,938	+		HSERO_RS09945	0.28	+0.5
2,248,267	-		HSERO_RS09945	0.69	-0.6
2,248,353	+		HSERO_RS09945	0.80	+0.3
2,248,382	+		HSERO_RS09945	0.84	-0.9
2,248,402	-		HSERO_RS09945	0.86	+0.4
2,248,561	-				-0.1