Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS09255

Experiment: Carbon source Phenylacetic 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Phenylacetic 5 mM
2,103,513	-				-0.4
2,104,054	+		HSERO_RS09250	0.53	-1.0
2,104,062	-		HSERO_RS09250	0.54	+0.1
2,104,436	-				-0.1
2,104,474	+		HSERO_RS09255	0.15	+0.4
2,104,563	+		HSERO_RS09255	0.29	+0.7
2,104,805	-		HSERO_RS09255	0.68	-0.3
2,104,966	+				-0.5
2,105,047	+				-0.5
2,105,158	-		HSERO_RS09260	0.26	-0.1
2,105,169	-		HSERO_RS09260	0.28	+0.7
2,105,254	-		HSERO_RS09260	0.42	+0.3
2,105,511	-		HSERO_RS09260	0.85	+2.0
2,105,521	+		HSERO_RS09260	0.86	-0.8
2,105,704	+				-0.8
2,105,712	-				+0.0
2,105,836	-		HSERO_RS09265	0.12	-0.1
2,105,852	+		HSERO_RS09265	0.13	+0.1
2,105,854	-		HSERO_RS09265	0.13	-0.2
2,105,964	+		HSERO_RS09265	0.21	+0.2