Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS08790

Experiment: Carbon source Phenylacetic 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Phenylacetic 5 mM
1,994,356	-		HSERO_RS08790	0.54	+0.8
1,994,615	-				-0.1
1,994,807	-				+0.8
1,994,807	-				+0.3
1,994,813	+				+0.5
1,994,813	-				+0.7
1,994,813	-				-0.1
1,994,861	+				-0.2
1,994,862	-				-0.5
1,994,996	+		HSERO_RS08795	0.17	-0.0
1,995,259	+		HSERO_RS08795	0.68	-0.8
1,995,384	-				-1.1
1,995,419	+				+0.5
1,995,456	-				+0.3
1,995,461	-				-0.2
1,995,463	+				-1.0
1,995,518	+				-0.5
1,995,557	+		HSERO_RS08800	0.10	-0.1