Experiment: Carbon source Phenylacetic 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS03910 and HSERO_RS03915 are separated by 48 nucleotides HSERO_RS03915 and HSERO_RS03920 are separated by 7 nucleotides HSERO_RS03920 and HSERO_RS03925 overlap by 4 nucleotides HSERO_RS03925 and HSERO_RS03930 overlap by 23 nucleotides
HSERO_RS03910: HSERO_RS03910 - hypothetical protein, at 862,350 to 863,399
_RS03910
HSERO_RS03915: HSERO_RS03915 - hypothetical protein, at 863,448 to 863,831
_RS03915
HSERO_RS03920: HSERO_RS03920 - hypothetical protein, at 863,839 to 864,165
_RS03920
HSERO_RS03925: HSERO_RS03925 - hypothetical protein, at 864,162 to 864,617
_RS03925
HSERO_RS03930: HSERO_RS03930 - hypothetical protein, at 864,595 to 864,894
_RS03930
Position (kb) 863
864 Strain fitness (log2 ratio) -1
0
1 at 862.543 kb on - strand, within HSERO_RS03910 at 862.797 kb on + strand, within HSERO_RS03910 at 862.873 kb on - strand, within HSERO_RS03910 at 863.306 kb on + strand at 863.306 kb on + strand at 863.478 kb on + strand at 863.519 kb on + strand, within HSERO_RS03915 at 863.521 kb on - strand, within HSERO_RS03915 at 863.815 kb on - strand at 864.017 kb on + strand, within HSERO_RS03920 at 864.025 kb on - strand, within HSERO_RS03920 at 864.146 kb on + strand at 864.154 kb on - strand at 864.246 kb on - strand, within HSERO_RS03925 at 864.369 kb on + strand, within HSERO_RS03925 at 864.451 kb on + strand, within HSERO_RS03925 at 864.627 kb on + strand, within HSERO_RS03930 at 864.654 kb on + strand, within HSERO_RS03930 at 864.666 kb on + strand, within HSERO_RS03930 at 864.671 kb on + strand, within HSERO_RS03930 at 864.674 kb on - strand, within HSERO_RS03930
Per-strain Table
Position Strand Gene LocusTag Fraction Carbon source Phenylacetic 5 mM remove 862,543 - HSERO_RS03910 0.18 +0.1 862,797 + HSERO_RS03910 0.43 -0.2 862,873 - HSERO_RS03910 0.50 -1.3 863,306 + +0.4 863,306 + +0.1 863,478 + -0.1 863,519 + HSERO_RS03915 0.18 +0.8 863,521 - HSERO_RS03915 0.19 +0.7 863,815 - -0.0 864,017 + HSERO_RS03920 0.54 -0.3 864,025 - HSERO_RS03920 0.57 +0.1 864,146 + -0.9 864,154 - -0.1 864,246 - HSERO_RS03925 0.18 +0.1 864,369 + HSERO_RS03925 0.45 +0.7 864,451 + HSERO_RS03925 0.63 +0.3 864,627 + HSERO_RS03930 0.11 -0.4 864,654 + HSERO_RS03930 0.20 -0.6 864,666 + HSERO_RS03930 0.24 -0.2 864,671 + HSERO_RS03930 0.25 -0.5 864,674 - HSERO_RS03930 0.26 +0.5
Or see this region's nucleotide sequence