Experiment: Carbon source Phenylacetic 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS03695 and HSERO_RS03700 are separated by 84 nucleotides HSERO_RS03700 and HSERO_RS03705 are separated by 11 nucleotides
HSERO_RS03695: HSERO_RS03695 - hypothetical protein, at 809,228 to 809,857
_RS03695
HSERO_RS03700: HSERO_RS03700 - type VI secretion protein, at 809,942 to 810,442
_RS03700
HSERO_RS03705: HSERO_RS03705 - EvpB family type VI secretion protein, at 810,454 to 811,941
_RS03705
Position (kb) 809
810
811 Strain fitness (log2 ratio) -1
0
1 at 808.943 kb on + strand at 808.943 kb on + strand at 808.961 kb on - strand at 808.966 kb on - strand at 809.023 kb on - strand at 809.099 kb on + strand at 809.115 kb on - strand at 809.119 kb on - strand at 809.122 kb on + strand at 809.122 kb on + strand at 809.130 kb on - strand at 809.130 kb on - strand at 809.136 kb on + strand at 809.146 kb on + strand at 809.147 kb on + strand at 809.154 kb on + strand at 809.155 kb on - strand at 809.155 kb on - strand at 809.157 kb on - strand at 809.164 kb on + strand at 809.172 kb on - strand at 809.216 kb on + strand at 809.218 kb on - strand at 809.224 kb on - strand at 809.241 kb on - strand at 809.241 kb on - strand at 809.252 kb on + strand at 809.252 kb on + strand at 809.260 kb on - strand at 809.265 kb on - strand at 809.267 kb on + strand at 809.275 kb on - strand at 809.296 kb on + strand, within HSERO_RS03695 at 809.308 kb on + strand, within HSERO_RS03695 at 809.332 kb on + strand, within HSERO_RS03695 at 809.341 kb on - strand, within HSERO_RS03695 at 809.341 kb on - strand, within HSERO_RS03695 at 809.365 kb on + strand, within HSERO_RS03695 at 809.373 kb on - strand, within HSERO_RS03695 at 809.476 kb on - strand, within HSERO_RS03695 at 809.662 kb on - strand, within HSERO_RS03695 at 809.745 kb on - strand, within HSERO_RS03695 at 809.745 kb on - strand, within HSERO_RS03695 at 809.760 kb on - strand, within HSERO_RS03695 at 809.795 kb on + strand at 809.829 kb on + strand at 809.923 kb on - strand at 809.980 kb on + strand at 810.165 kb on - strand, within HSERO_RS03700 at 810.542 kb on - strand at 810.559 kb on + strand at 810.562 kb on - strand at 810.577 kb on - strand at 810.610 kb on - strand, within HSERO_RS03705 at 810.667 kb on + strand, within HSERO_RS03705 at 810.688 kb on + strand, within HSERO_RS03705 at 810.748 kb on + strand, within HSERO_RS03705 at 810.748 kb on + strand, within HSERO_RS03705 at 810.761 kb on - strand, within HSERO_RS03705 at 810.814 kb on + strand, within HSERO_RS03705 at 810.919 kb on + strand, within HSERO_RS03705 at 811.100 kb on - strand, within HSERO_RS03705 at 811.160 kb on + strand, within HSERO_RS03705 at 811.302 kb on - strand, within HSERO_RS03705 at 811.312 kb on + strand, within HSERO_RS03705 at 811.325 kb on - strand, within HSERO_RS03705
Per-strain Table
Position Strand Gene LocusTag Fraction Carbon source Phenylacetic 5 mM remove 808,943 + -0.1 808,943 + +0.2 808,961 - +0.5 808,966 - +0.4 809,023 - -0.5 809,099 + -0.0 809,115 - +0.6 809,119 - +0.1 809,122 + -0.7 809,122 + -0.9 809,130 - -0.3 809,130 - +0.2 809,136 + +0.6 809,146 + +0.9 809,147 + -0.1 809,154 + +0.1 809,155 - +0.1 809,155 - -0.9 809,157 - +0.2 809,164 + -0.7 809,172 - +0.6 809,216 + +0.5 809,218 - +0.8 809,224 - +0.3 809,241 - +0.3 809,241 - +0.3 809,252 + +0.1 809,252 + +0.3 809,260 - -0.1 809,265 - -0.5 809,267 + +0.7 809,275 - -0.2 809,296 + HSERO_RS03695 0.11 -0.0 809,308 + HSERO_RS03695 0.13 -0.4 809,332 + HSERO_RS03695 0.17 +0.0 809,341 - HSERO_RS03695 0.18 +0.6 809,341 - HSERO_RS03695 0.18 +0.8 809,365 + HSERO_RS03695 0.22 -0.1 809,373 - HSERO_RS03695 0.23 +1.4 809,476 - HSERO_RS03695 0.39 +0.4 809,662 - HSERO_RS03695 0.69 -0.1 809,745 - HSERO_RS03695 0.82 +0.3 809,745 - HSERO_RS03695 0.82 -0.7 809,760 - HSERO_RS03695 0.84 -0.6 809,795 + +0.1 809,829 + +0.2 809,923 - +0.5 809,980 + +0.9 810,165 - HSERO_RS03700 0.45 +0.7 810,542 - -0.4 810,559 + +0.2 810,562 - +0.2 810,577 - -0.4 810,610 - HSERO_RS03705 0.10 +0.7 810,667 + HSERO_RS03705 0.14 +0.4 810,688 + HSERO_RS03705 0.16 -0.2 810,748 + HSERO_RS03705 0.20 -1.0 810,748 + HSERO_RS03705 0.20 +0.2 810,761 - HSERO_RS03705 0.21 +0.2 810,814 + HSERO_RS03705 0.24 +0.9 810,919 + HSERO_RS03705 0.31 -1.1 811,100 - HSERO_RS03705 0.43 +0.2 811,160 + HSERO_RS03705 0.47 +0.7 811,302 - HSERO_RS03705 0.57 -0.5 811,312 + HSERO_RS03705 0.58 -1.1 811,325 - HSERO_RS03705 0.59 -0.3
Or see this region's nucleotide sequence