Experiment: Carbon source Phenylacetic 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS03035 and HSERO_RS03040 are separated by 193 nucleotides HSERO_RS03040 and HSERO_RS03045 are separated by 87 nucleotides HSERO_RS03045 and HSERO_RS03050 are separated by 71 nucleotides HSERO_RS03050 and HSERO_RS03055 are separated by 36 nucleotides
HSERO_RS03035: HSERO_RS03035 - small protein A, at 664,144 to 664,689
_RS03035
HSERO_RS03040: HSERO_RS03040 - Fur family transcriptional regulator, at 664,883 to 665,308
_RS03040
HSERO_RS03045: HSERO_RS03045 - HrcA family transcriptional regulator, at 665,396 to 666,424
_RS03045
HSERO_RS03050: HSERO_RS03050 - hydrolase, at 666,496 to 667,230
_RS03050
HSERO_RS03055: HSERO_RS03055 - inorganic polyphosphate/ATP-NAD kinase, at 667,267 to 668,184
_RS03055
Position (kb) 665
666
667 Strain fitness (log2 ratio) -1
0
1
2 at 665.315 kb on + strand at 665.459 kb on + strand at 665.614 kb on + strand, within HSERO_RS03045 at 665.727 kb on - strand, within HSERO_RS03045 at 665.738 kb on - strand, within HSERO_RS03045 at 665.851 kb on + strand, within HSERO_RS03045 at 665.863 kb on + strand, within HSERO_RS03045 at 665.868 kb on + strand, within HSERO_RS03045 at 665.991 kb on - strand, within HSERO_RS03045 at 666.083 kb on + strand, within HSERO_RS03045 at 666.083 kb on + strand, within HSERO_RS03045 at 666.243 kb on - strand, within HSERO_RS03045 at 666.387 kb on + strand at 666.387 kb on + strand at 666.388 kb on - strand at 666.395 kb on - strand at 666.397 kb on - strand at 666.560 kb on + strand at 666.608 kb on + strand, within HSERO_RS03050 at 666.736 kb on - strand, within HSERO_RS03050 at 666.817 kb on - strand, within HSERO_RS03050 at 666.887 kb on - strand, within HSERO_RS03050 at 666.904 kb on + strand, within HSERO_RS03050 at 666.907 kb on - strand, within HSERO_RS03050 at 666.907 kb on - strand, within HSERO_RS03050 at 666.912 kb on - strand, within HSERO_RS03050 at 667.024 kb on - strand, within HSERO_RS03050 at 667.028 kb on + strand, within HSERO_RS03050 at 667.107 kb on - strand, within HSERO_RS03050 at 667.149 kb on + strand, within HSERO_RS03050 at 667.209 kb on + strand at 667.217 kb on - strand at 667.265 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Carbon source Phenylacetic 5 mM remove 665,315 + -0.4 665,459 + +0.6 665,614 + HSERO_RS03045 0.21 +0.9 665,727 - HSERO_RS03045 0.32 +0.5 665,738 - HSERO_RS03045 0.33 +0.5 665,851 + HSERO_RS03045 0.44 +0.9 665,863 + HSERO_RS03045 0.45 +1.0 665,868 + HSERO_RS03045 0.46 +1.2 665,991 - HSERO_RS03045 0.58 +0.3 666,083 + HSERO_RS03045 0.67 +0.7 666,083 + HSERO_RS03045 0.67 +0.6 666,243 - HSERO_RS03045 0.82 -0.6 666,387 + +0.7 666,387 + +1.0 666,388 - +0.1 666,395 - -0.0 666,397 - +0.4 666,560 + -0.1 666,608 + HSERO_RS03050 0.15 +0.2 666,736 - HSERO_RS03050 0.33 +0.1 666,817 - HSERO_RS03050 0.44 +0.1 666,887 - HSERO_RS03050 0.53 -0.6 666,904 + HSERO_RS03050 0.56 +1.9 666,907 - HSERO_RS03050 0.56 +0.7 666,907 - HSERO_RS03050 0.56 +0.2 666,912 - HSERO_RS03050 0.57 +1.2 667,024 - HSERO_RS03050 0.72 +0.3 667,028 + HSERO_RS03050 0.72 -0.9 667,107 - HSERO_RS03050 0.83 +0.3 667,149 + HSERO_RS03050 0.89 +0.4 667,209 + +0.4 667,217 - -0.4 667,265 + +0.9
Or see this region's nucleotide sequence