Experiment: Carbon source Phenylacetic 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS00740 and HSERO_RS00745 are separated by 147 nucleotides HSERO_RS00745 and HSERO_RS00750 are separated by 111 nucleotides
HSERO_RS00740: HSERO_RS00740 - ABC transporter permease, at 154,919 to 156,133
_RS00740
HSERO_RS00745: HSERO_RS00745 - alkylhydroperoxidase, at 156,281 to 156,742
_RS00745
HSERO_RS00750: HSERO_RS00750 - RNA polymerase subunit sigma-24, at 156,854 to 157,828
_RS00750
Position (kb) 156
157 Strain fitness (log2 ratio) -1
0
1 at 155.338 kb on + strand, within HSERO_RS00740 at 155.346 kb on - strand, within HSERO_RS00740 at 155.595 kb on + strand, within HSERO_RS00740 at 155.662 kb on + strand, within HSERO_RS00740 at 155.695 kb on - strand, within HSERO_RS00740 at 155.731 kb on + strand, within HSERO_RS00740 at 155.888 kb on + strand, within HSERO_RS00740 at 155.919 kb on + strand, within HSERO_RS00740 at 155.922 kb on - strand at 155.976 kb on + strand, within HSERO_RS00740 at 156.083 kb on + strand at 156.445 kb on - strand at 156.459 kb on + strand, within HSERO_RS00745 at 156.601 kb on + strand, within HSERO_RS00745 at 156.601 kb on + strand, within HSERO_RS00745 at 156.716 kb on + strand at 156.815 kb on + strand at 157.234 kb on - strand, within HSERO_RS00750 at 157.261 kb on + strand, within HSERO_RS00750 at 157.271 kb on + strand, within HSERO_RS00750 at 157.418 kb on + strand, within HSERO_RS00750 at 157.425 kb on + strand, within HSERO_RS00750 at 157.428 kb on - strand, within HSERO_RS00750 at 157.433 kb on - strand, within HSERO_RS00750 at 157.542 kb on + strand, within HSERO_RS00750 at 157.556 kb on - strand, within HSERO_RS00750 at 157.585 kb on + strand, within HSERO_RS00750 at 157.585 kb on + strand, within HSERO_RS00750 at 157.686 kb on + strand, within HSERO_RS00750
Per-strain Table
Position Strand Gene LocusTag Fraction Carbon source Phenylacetic 5 mM remove 155,338 + HSERO_RS00740 0.34 +0.2 155,346 - HSERO_RS00740 0.35 +0.1 155,595 + HSERO_RS00740 0.56 -0.0 155,662 + HSERO_RS00740 0.61 +0.2 155,695 - HSERO_RS00740 0.64 -1.2 155,731 + HSERO_RS00740 0.67 -0.0 155,888 + HSERO_RS00740 0.80 -0.5 155,919 + HSERO_RS00740 0.82 +0.0 155,922 - -0.6 155,976 + HSERO_RS00740 0.87 -0.2 156,083 + +1.2 156,445 - +1.6 156,459 + HSERO_RS00745 0.39 +0.7 156,601 + HSERO_RS00745 0.69 +0.2 156,601 + HSERO_RS00745 0.69 +0.7 156,716 + +0.7 156,815 + +1.6 157,234 - HSERO_RS00750 0.39 +0.4 157,261 + HSERO_RS00750 0.42 +0.3 157,271 + HSERO_RS00750 0.43 -0.1 157,418 + HSERO_RS00750 0.58 -0.2 157,425 + HSERO_RS00750 0.59 +0.2 157,428 - HSERO_RS00750 0.59 -0.6 157,433 - HSERO_RS00750 0.59 +0.8 157,542 + HSERO_RS00750 0.71 +0.0 157,556 - HSERO_RS00750 0.72 -0.7 157,585 + HSERO_RS00750 0.75 +1.4 157,585 + HSERO_RS00750 0.75 -0.8 157,686 + HSERO_RS00750 0.85 -0.2
Or see this region's nucleotide sequence