Experiment: L-Glutamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_21920 and AO353_21925 overlap by 4 nucleotides AO353_21925 and AO353_21930 are separated by 70 nucleotides
AO353_21920: AO353_21920 - cytochrome C oxidase Cbb3, at 4,805,383 to 4,806,876
_21920
AO353_21925: AO353_21925 - uroporphyrin-III methyltransferase, at 4,806,873 to 4,807,712
_21925
AO353_21930: AO353_21930 - heme d1 biosynthesis radical SAM protein NirJ, at 4,807,783 to 4,808,961
_21930
Position (kb)
4806
4807
4808 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 4805.946 kb on - strand, within AO353_21920 at 4806.092 kb on + strand, within AO353_21920 at 4806.092 kb on + strand, within AO353_21920 at 4806.092 kb on + strand, within AO353_21920 at 4806.093 kb on - strand, within AO353_21920 at 4806.093 kb on - strand, within AO353_21920 at 4806.093 kb on - strand, within AO353_21920 at 4806.197 kb on + strand, within AO353_21920 at 4806.197 kb on + strand, within AO353_21920 at 4806.197 kb on + strand, within AO353_21920 at 4806.198 kb on - strand, within AO353_21920 at 4806.198 kb on - strand, within AO353_21920 at 4806.198 kb on - strand, within AO353_21920 at 4806.198 kb on - strand, within AO353_21920 at 4806.198 kb on - strand, within AO353_21920 at 4806.198 kb on - strand, within AO353_21920 at 4806.198 kb on - strand, within AO353_21920 at 4806.198 kb on - strand, within AO353_21920 at 4806.299 kb on + strand, within AO353_21920 at 4806.299 kb on + strand, within AO353_21920 at 4806.299 kb on + strand, within AO353_21920 at 4806.300 kb on - strand, within AO353_21920 at 4806.332 kb on + strand, within AO353_21920 at 4806.333 kb on - strand, within AO353_21920 at 4806.516 kb on + strand, within AO353_21920 at 4806.555 kb on + strand, within AO353_21920 at 4806.593 kb on + strand, within AO353_21920 at 4806.593 kb on + strand, within AO353_21920 at 4806.594 kb on - strand, within AO353_21920 at 4806.877 kb on - strand at 4806.877 kb on - strand at 4806.948 kb on - strand at 4807.068 kb on - strand, within AO353_21925 at 4807.159 kb on + strand, within AO353_21925 at 4807.159 kb on + strand, within AO353_21925 at 4807.159 kb on + strand, within AO353_21925 at 4807.159 kb on + strand, within AO353_21925 at 4807.160 kb on - strand, within AO353_21925 at 4807.160 kb on - strand, within AO353_21925 at 4807.160 kb on - strand, within AO353_21925 at 4807.160 kb on - strand at 4807.291 kb on + strand, within AO353_21925 at 4807.291 kb on + strand, within AO353_21925 at 4807.299 kb on - strand at 4807.316 kb on + strand, within AO353_21925 at 4807.316 kb on + strand, within AO353_21925 at 4807.346 kb on + strand, within AO353_21925 at 4807.346 kb on + strand, within AO353_21925 at 4807.346 kb on + strand, within AO353_21925 at 4807.346 kb on + strand, within AO353_21925 at 4807.346 kb on + strand, within AO353_21925 at 4807.346 kb on + strand, within AO353_21925 at 4807.346 kb on + strand at 4807.346 kb on + strand, within AO353_21925 at 4807.346 kb on + strand, within AO353_21925 at 4807.347 kb on - strand, within AO353_21925 at 4807.347 kb on - strand, within AO353_21925 at 4807.347 kb on - strand, within AO353_21925 at 4807.360 kb on + strand, within AO353_21925 at 4807.360 kb on + strand, within AO353_21925 at 4807.361 kb on - strand, within AO353_21925 at 4807.361 kb on - strand, within AO353_21925 at 4807.361 kb on - strand, within AO353_21925 at 4807.390 kb on - strand, within AO353_21925 at 4807.452 kb on + strand, within AO353_21925 at 4807.452 kb on + strand, within AO353_21925 at 4807.452 kb on + strand, within AO353_21925 at 4807.452 kb on + strand, within AO353_21925 at 4807.453 kb on - strand, within AO353_21925 at 4807.453 kb on - strand, within AO353_21925 at 4807.453 kb on - strand, within AO353_21925 at 4807.507 kb on + strand, within AO353_21925 at 4807.508 kb on - strand, within AO353_21925 at 4807.508 kb on - strand, within AO353_21925 at 4807.508 kb on - strand, within AO353_21925 at 4807.567 kb on + strand, within AO353_21925 at 4807.568 kb on - strand, within AO353_21925 at 4807.698 kb on - strand at 4808.057 kb on + strand, within AO353_21930 at 4808.057 kb on + strand, within AO353_21930 at 4808.058 kb on - strand, within AO353_21930 at 4808.058 kb on - strand, within AO353_21930 at 4808.058 kb on - strand, within AO353_21930 at 4808.058 kb on - strand, within AO353_21930 at 4808.058 kb on - strand, within AO353_21930 at 4808.058 kb on - strand, within AO353_21930 at 4808.058 kb on - strand, within AO353_21930 at 4808.058 kb on - strand, within AO353_21930 at 4808.058 kb on - strand, within AO353_21930 at 4808.058 kb on - strand, within AO353_21930 at 4808.071 kb on + strand, within AO353_21930 at 4808.071 kb on + strand, within AO353_21930 at 4808.071 kb on + strand, within AO353_21930 at 4808.072 kb on - strand, within AO353_21930 at 4808.072 kb on - strand at 4808.072 kb on - strand, within AO353_21930 at 4808.072 kb on - strand, within AO353_21930 at 4808.072 kb on - strand, within AO353_21930 at 4808.072 kb on - strand, within AO353_21930 at 4808.139 kb on + strand, within AO353_21930 at 4808.139 kb on + strand, within AO353_21930 at 4808.139 kb on + strand, within AO353_21930 at 4808.139 kb on + strand, within AO353_21930 at 4808.139 kb on + strand, within AO353_21930 at 4808.139 kb on + strand, within AO353_21930 at 4808.139 kb on + strand, within AO353_21930 at 4808.139 kb on + strand, within AO353_21930 at 4808.139 kb on + strand, within AO353_21930 at 4808.139 kb on + strand, within AO353_21930 at 4808.140 kb on - strand, within AO353_21930 at 4808.140 kb on - strand, within AO353_21930 at 4808.140 kb on - strand, within AO353_21930 at 4808.140 kb on - strand, within AO353_21930 at 4808.140 kb on - strand, within AO353_21930 at 4808.140 kb on - strand, within AO353_21930 at 4808.140 kb on - strand, within AO353_21930 at 4808.140 kb on - strand, within AO353_21930 at 4808.140 kb on - strand, within AO353_21930 at 4808.140 kb on - strand, within AO353_21930 at 4808.140 kb on - strand, within AO353_21930 at 4808.157 kb on - strand, within AO353_21930 at 4808.168 kb on - strand, within AO353_21930 at 4808.168 kb on - strand, within AO353_21930 at 4808.168 kb on - strand, within AO353_21930 at 4808.168 kb on - strand, within AO353_21930 at 4808.348 kb on + strand, within AO353_21930 at 4808.348 kb on + strand, within AO353_21930 at 4808.348 kb on + strand, within AO353_21930 at 4808.349 kb on - strand, within AO353_21930 at 4808.366 kb on + strand, within AO353_21930 at 4808.367 kb on - strand, within AO353_21930 at 4808.384 kb on + strand, within AO353_21930 at 4808.573 kb on + strand, within AO353_21930 at 4808.574 kb on - strand, within AO353_21930 at 4808.574 kb on - strand, within AO353_21930 at 4808.669 kb on + strand, within AO353_21930 at 4808.669 kb on + strand, within AO353_21930 at 4808.670 kb on - strand, within AO353_21930
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (N) remove 4,805,946 - AO353_21920 0.38 +0.6 4,806,092 + AO353_21920 0.47 -1.7 4,806,092 + AO353_21920 0.47 +0.4 4,806,092 + AO353_21920 0.47 +0.0 4,806,093 - AO353_21920 0.48 -0.3 4,806,093 - AO353_21920 0.48 -1.0 4,806,093 - AO353_21920 0.48 -0.9 4,806,197 + AO353_21920 0.54 +2.0 4,806,197 + AO353_21920 0.54 -1.3 4,806,197 + AO353_21920 0.54 +1.0 4,806,198 - AO353_21920 0.55 -0.3 4,806,198 - AO353_21920 0.55 -0.7 4,806,198 - AO353_21920 0.55 -0.9 4,806,198 - AO353_21920 0.55 +0.4 4,806,198 - AO353_21920 0.55 +0.3 4,806,198 - AO353_21920 0.55 -1.1 4,806,198 - AO353_21920 0.55 -0.3 4,806,198 - AO353_21920 0.55 -1.1 4,806,299 + AO353_21920 0.61 -0.4 4,806,299 + AO353_21920 0.61 -0.7 4,806,299 + AO353_21920 0.61 +0.8 4,806,300 - AO353_21920 0.61 +0.1 4,806,332 + AO353_21920 0.64 +0.3 4,806,333 - AO353_21920 0.64 -1.3 4,806,516 + AO353_21920 0.76 -0.4 4,806,555 + AO353_21920 0.78 +0.6 4,806,593 + AO353_21920 0.81 +0.0 4,806,593 + AO353_21920 0.81 -0.6 4,806,594 - AO353_21920 0.81 +0.2 4,806,877 - +0.3 4,806,877 - +0.1 4,806,948 - -0.4 4,807,068 - AO353_21925 0.23 -0.1 4,807,159 + AO353_21925 0.34 -0.1 4,807,159 + AO353_21925 0.34 -0.8 4,807,159 + AO353_21925 0.34 +0.7 4,807,159 + AO353_21925 0.34 -0.8 4,807,160 - AO353_21925 0.34 +1.0 4,807,160 - AO353_21925 0.34 -0.6 4,807,160 - AO353_21925 0.34 -0.1 4,807,160 - +0.0 4,807,291 + AO353_21925 0.50 -2.1 4,807,291 + AO353_21925 0.50 +1.0 4,807,299 - -0.6 4,807,316 + AO353_21925 0.53 -1.6 4,807,316 + AO353_21925 0.53 +0.1 4,807,346 + AO353_21925 0.56 +0.2 4,807,346 + AO353_21925 0.56 +0.0 4,807,346 + AO353_21925 0.56 -0.6 4,807,346 + AO353_21925 0.56 +0.8 4,807,346 + AO353_21925 0.56 +0.2 4,807,346 + AO353_21925 0.56 -0.5 4,807,346 + +1.6 4,807,346 + AO353_21925 0.56 +0.0 4,807,346 + AO353_21925 0.56 +1.4 4,807,347 - AO353_21925 0.56 -1.4 4,807,347 - AO353_21925 0.56 +0.3 4,807,347 - AO353_21925 0.56 +0.9 4,807,360 + AO353_21925 0.58 +0.2 4,807,360 + AO353_21925 0.58 -0.9 4,807,361 - AO353_21925 0.58 +1.0 4,807,361 - AO353_21925 0.58 -0.4 4,807,361 - AO353_21925 0.58 -0.8 4,807,390 - AO353_21925 0.62 -0.3 4,807,452 + AO353_21925 0.69 -0.7 4,807,452 + AO353_21925 0.69 +0.5 4,807,452 + AO353_21925 0.69 +0.0 4,807,452 + AO353_21925 0.69 -1.4 4,807,453 - AO353_21925 0.69 -0.9 4,807,453 - AO353_21925 0.69 -0.2 4,807,453 - AO353_21925 0.69 +0.4 4,807,507 + AO353_21925 0.75 -0.7 4,807,508 - AO353_21925 0.76 -2.3 4,807,508 - AO353_21925 0.76 +1.4 4,807,508 - AO353_21925 0.76 -0.2 4,807,567 + AO353_21925 0.83 +0.0 4,807,568 - AO353_21925 0.83 +1.0 4,807,698 - -0.1 4,808,057 + AO353_21930 0.23 +0.4 4,808,057 + AO353_21930 0.23 -0.1 4,808,058 - AO353_21930 0.23 +0.2 4,808,058 - AO353_21930 0.23 -0.3 4,808,058 - AO353_21930 0.23 -2.0 4,808,058 - AO353_21930 0.23 +0.8 4,808,058 - AO353_21930 0.23 -1.0 4,808,058 - AO353_21930 0.23 +1.0 4,808,058 - AO353_21930 0.23 +3.0 4,808,058 - AO353_21930 0.23 +0.4 4,808,058 - AO353_21930 0.23 -0.6 4,808,058 - AO353_21930 0.23 +0.2 4,808,071 + AO353_21930 0.24 +0.8 4,808,071 + AO353_21930 0.24 -1.4 4,808,071 + AO353_21930 0.24 +0.3 4,808,072 - AO353_21930 0.25 +0.0 4,808,072 - -0.6 4,808,072 - AO353_21930 0.25 +0.8 4,808,072 - AO353_21930 0.25 +0.3 4,808,072 - AO353_21930 0.25 +0.6 4,808,072 - AO353_21930 0.25 +0.7 4,808,139 + AO353_21930 0.30 -0.4 4,808,139 + AO353_21930 0.30 -0.6 4,808,139 + AO353_21930 0.30 +0.0 4,808,139 + AO353_21930 0.30 -1.8 4,808,139 + AO353_21930 0.30 +0.6 4,808,139 + AO353_21930 0.30 -1.0 4,808,139 + AO353_21930 0.30 -0.2 4,808,139 + AO353_21930 0.30 +0.6 4,808,139 + AO353_21930 0.30 -0.3 4,808,139 + AO353_21930 0.30 +0.3 4,808,140 - AO353_21930 0.30 +2.2 4,808,140 - AO353_21930 0.30 -0.0 4,808,140 - AO353_21930 0.30 +0.2 4,808,140 - AO353_21930 0.30 -1.2 4,808,140 - AO353_21930 0.30 -0.8 4,808,140 - AO353_21930 0.30 +0.6 4,808,140 - AO353_21930 0.30 -0.6 4,808,140 - AO353_21930 0.30 +0.2 4,808,140 - AO353_21930 0.30 +1.0 4,808,140 - AO353_21930 0.30 +1.2 4,808,140 - AO353_21930 0.30 +0.5 4,808,157 - AO353_21930 0.32 +0.1 4,808,168 - AO353_21930 0.33 +0.4 4,808,168 - AO353_21930 0.33 -0.2 4,808,168 - AO353_21930 0.33 -1.1 4,808,168 - AO353_21930 0.33 -0.6 4,808,348 + AO353_21930 0.48 -1.1 4,808,348 + AO353_21930 0.48 +0.3 4,808,348 + AO353_21930 0.48 +0.3 4,808,349 - AO353_21930 0.48 +1.1 4,808,366 + AO353_21930 0.49 +1.3 4,808,367 - AO353_21930 0.50 -0.4 4,808,384 + AO353_21930 0.51 -2.6 4,808,573 + AO353_21930 0.67 -0.9 4,808,574 - AO353_21930 0.67 +0.6 4,808,574 - AO353_21930 0.67 -1.4 4,808,669 + AO353_21930 0.75 -0.5 4,808,669 + AO353_21930 0.75 +0.3 4,808,670 - AO353_21930 0.75 -0.6
Or see this region's nucleotide sequence