Experiment: L-Glutamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_17660 and AO353_17665 are separated by 10 nucleotides AO353_17665 and AO353_17670 are separated by 329 nucleotides AO353_17670 and AO353_17675 are separated by 17 nucleotides
AO353_17660: AO353_17660 - peroxiredoxin, at 3,892,186 to 3,892,659
_17660
AO353_17665: AO353_17665 - glycine cleavage system protein R, at 3,892,670 to 3,893,230
_17665
AO353_17670: AO353_17670 - 4-hydroxy-tetrahydrodipicolinate synthase, at 3,893,560 to 3,894,438
_17670
AO353_17675: AO353_17675 - hypothetical protein, at 3,894,456 to 3,895,571
_17675
Position (kb)
3893
3894
3895 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3892.647 kb on + strand at 3892.671 kb on + strand at 3892.671 kb on + strand at 3892.671 kb on + strand at 3892.671 kb on + strand at 3892.671 kb on + strand at 3892.671 kb on + strand at 3892.671 kb on + strand at 3892.672 kb on - strand at 3892.672 kb on - strand at 3892.672 kb on - strand at 3892.672 kb on - strand at 3892.672 kb on - strand at 3892.672 kb on - strand at 3892.672 kb on - strand at 3892.672 kb on - strand at 3892.672 kb on - strand at 3892.672 kb on - strand at 3892.672 kb on - strand at 3892.672 kb on - strand at 3892.789 kb on + strand, within AO353_17665 at 3892.790 kb on - strand, within AO353_17665 at 3892.833 kb on + strand, within AO353_17665 at 3892.833 kb on + strand, within AO353_17665 at 3892.833 kb on + strand, within AO353_17665 at 3892.833 kb on + strand, within AO353_17665 at 3892.834 kb on - strand, within AO353_17665 at 3892.834 kb on - strand, within AO353_17665 at 3892.834 kb on - strand, within AO353_17665 at 3892.834 kb on - strand, within AO353_17665 at 3892.834 kb on - strand, within AO353_17665 at 3892.834 kb on - strand, within AO353_17665 at 3892.834 kb on - strand, within AO353_17665 at 3892.834 kb on - strand, within AO353_17665 at 3892.834 kb on - strand, within AO353_17665 at 3892.929 kb on + strand, within AO353_17665 at 3892.929 kb on + strand, within AO353_17665 at 3892.929 kb on + strand, within AO353_17665 at 3892.930 kb on - strand, within AO353_17665 at 3892.930 kb on - strand, within AO353_17665 at 3892.930 kb on - strand, within AO353_17665 at 3892.930 kb on - strand, within AO353_17665 at 3892.930 kb on - strand, within AO353_17665 at 3892.930 kb on - strand, within AO353_17665 at 3892.930 kb on - strand, within AO353_17665 at 3892.930 kb on - strand, within AO353_17665 at 3892.930 kb on - strand, within AO353_17665 at 3892.939 kb on - strand, within AO353_17665 at 3892.939 kb on - strand, within AO353_17665 at 3892.939 kb on - strand, within AO353_17665 at 3892.939 kb on - strand at 3892.939 kb on - strand, within AO353_17665 at 3892.939 kb on - strand, within AO353_17665 at 3893.241 kb on + strand at 3893.242 kb on - strand at 3893.260 kb on + strand at 3893.260 kb on + strand at 3893.261 kb on - strand at 3893.261 kb on - strand at 3893.261 kb on - strand at 3893.264 kb on + strand at 3893.264 kb on + strand at 3893.264 kb on + strand at 3893.264 kb on + strand at 3893.264 kb on + strand at 3893.264 kb on + strand at 3893.264 kb on + strand at 3893.264 kb on + strand at 3893.264 kb on + strand at 3893.264 kb on + strand at 3893.265 kb on - strand at 3893.265 kb on - strand at 3893.265 kb on - strand at 3893.265 kb on - strand at 3893.265 kb on - strand at 3893.265 kb on - strand at 3893.265 kb on - strand at 3893.265 kb on - strand at 3893.265 kb on - strand at 3893.265 kb on - strand at 3893.265 kb on - strand at 3893.417 kb on + strand at 3893.491 kb on + strand at 3893.491 kb on + strand at 3893.492 kb on - strand at 3893.492 kb on - strand at 3894.428 kb on + strand at 3894.428 kb on + strand at 3894.448 kb on + strand at 3894.448 kb on + strand at 3894.449 kb on - strand at 3894.494 kb on + strand at 3894.564 kb on + strand at 3894.564 kb on + strand at 3894.614 kb on + strand, within AO353_17675 at 3894.614 kb on + strand, within AO353_17675 at 3894.684 kb on + strand, within AO353_17675 at 3894.735 kb on + strand, within AO353_17675 at 3895.011 kb on + strand, within AO353_17675 at 3895.011 kb on + strand, within AO353_17675 at 3895.011 kb on + strand, within AO353_17675 at 3895.012 kb on - strand, within AO353_17675 at 3895.012 kb on - strand, within AO353_17675 at 3895.332 kb on + strand, within AO353_17675 at 3895.332 kb on + strand, within AO353_17675 at 3895.332 kb on + strand, within AO353_17675 at 3895.332 kb on + strand, within AO353_17675 at 3895.333 kb on - strand, within AO353_17675 at 3895.335 kb on + strand, within AO353_17675 at 3895.335 kb on + strand, within AO353_17675 at 3895.335 kb on + strand, within AO353_17675 at 3895.335 kb on + strand, within AO353_17675 at 3895.335 kb on + strand, within AO353_17675 at 3895.335 kb on + strand, within AO353_17675 at 3895.335 kb on + strand, within AO353_17675 at 3895.335 kb on + strand, within AO353_17675
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (N) remove 3,892,647 + +0.1 3,892,671 + -0.1 3,892,671 + -0.4 3,892,671 + +0.0 3,892,671 + +0.5 3,892,671 + -0.2 3,892,671 + +0.1 3,892,671 + +2.2 3,892,672 - -0.9 3,892,672 - -0.7 3,892,672 - -0.3 3,892,672 - +0.3 3,892,672 - -0.0 3,892,672 - -0.6 3,892,672 - -0.5 3,892,672 - +0.2 3,892,672 - +1.0 3,892,672 - +1.2 3,892,672 - +0.0 3,892,672 - -0.4 3,892,789 + AO353_17665 0.21 -0.1 3,892,790 - AO353_17665 0.21 +0.5 3,892,833 + AO353_17665 0.29 +0.2 3,892,833 + AO353_17665 0.29 -0.1 3,892,833 + AO353_17665 0.29 -0.3 3,892,833 + AO353_17665 0.29 -0.1 3,892,834 - AO353_17665 0.29 -0.6 3,892,834 - AO353_17665 0.29 -1.7 3,892,834 - AO353_17665 0.29 -0.2 3,892,834 - AO353_17665 0.29 -0.4 3,892,834 - AO353_17665 0.29 +0.3 3,892,834 - AO353_17665 0.29 -0.5 3,892,834 - AO353_17665 0.29 +0.1 3,892,834 - AO353_17665 0.29 -0.1 3,892,834 - AO353_17665 0.29 +0.9 3,892,929 + AO353_17665 0.46 -0.4 3,892,929 + AO353_17665 0.46 -0.5 3,892,929 + AO353_17665 0.46 +0.7 3,892,930 - AO353_17665 0.46 +0.3 3,892,930 - AO353_17665 0.46 +0.9 3,892,930 - AO353_17665 0.46 +0.5 3,892,930 - AO353_17665 0.46 +1.0 3,892,930 - AO353_17665 0.46 +0.0 3,892,930 - AO353_17665 0.46 +0.0 3,892,930 - AO353_17665 0.46 -1.0 3,892,930 - AO353_17665 0.46 -0.4 3,892,930 - AO353_17665 0.46 -0.1 3,892,939 - AO353_17665 0.48 +1.1 3,892,939 - AO353_17665 0.48 +0.2 3,892,939 - AO353_17665 0.48 +0.3 3,892,939 - +0.8 3,892,939 - AO353_17665 0.48 -0.2 3,892,939 - AO353_17665 0.48 +0.1 3,893,241 + -0.4 3,893,242 - -0.7 3,893,260 + -0.0 3,893,260 + +0.3 3,893,261 - +0.1 3,893,261 - -0.0 3,893,261 - -0.9 3,893,264 + +0.7 3,893,264 + -1.0 3,893,264 + +0.2 3,893,264 + -0.6 3,893,264 + -0.6 3,893,264 + -0.7 3,893,264 + +1.1 3,893,264 + +0.2 3,893,264 + +0.6 3,893,264 + +0.5 3,893,265 - -0.2 3,893,265 - +1.3 3,893,265 - -0.9 3,893,265 - -0.8 3,893,265 - -0.2 3,893,265 - +0.3 3,893,265 - -0.8 3,893,265 - -0.5 3,893,265 - -0.8 3,893,265 - -0.1 3,893,265 - -0.5 3,893,417 + -1.1 3,893,491 + +0.5 3,893,491 + -0.1 3,893,492 - -0.8 3,893,492 - -1.0 3,894,428 + -0.7 3,894,428 + +0.2 3,894,448 + -0.1 3,894,448 + +0.1 3,894,449 - -2.8 3,894,494 + -1.3 3,894,564 + -1.2 3,894,564 + -1.3 3,894,614 + AO353_17675 0.14 +0.9 3,894,614 + AO353_17675 0.14 +0.5 3,894,684 + AO353_17675 0.20 -1.2 3,894,735 + AO353_17675 0.25 +0.3 3,895,011 + AO353_17675 0.50 -2.0 3,895,011 + AO353_17675 0.50 +0.0 3,895,011 + AO353_17675 0.50 -0.8 3,895,012 - AO353_17675 0.50 -1.7 3,895,012 - AO353_17675 0.50 -1.7 3,895,332 + AO353_17675 0.78 -1.7 3,895,332 + AO353_17675 0.78 -1.0 3,895,332 + AO353_17675 0.78 -0.7 3,895,332 + AO353_17675 0.78 -0.1 3,895,333 - AO353_17675 0.79 -1.4 3,895,335 + AO353_17675 0.79 -0.0 3,895,335 + AO353_17675 0.79 +0.0 3,895,335 + AO353_17675 0.79 +0.0 3,895,335 + AO353_17675 0.79 -0.7 3,895,335 + AO353_17675 0.79 -1.8 3,895,335 + AO353_17675 0.79 +0.8 3,895,335 + AO353_17675 0.79 -0.2 3,895,335 + AO353_17675 0.79 +0.7
Or see this region's nucleotide sequence