Experiment: L-Glutamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_16430 and AO353_16435 are separated by 137 nucleotides AO353_16435 and AO353_16440 are separated by 33 nucleotides AO353_16440 and AO353_16445 are separated by 224 nucleotides
AO353_16430: AO353_16430 - cysteine sulfinate desulfinase, at 3,647,624 to 3,648,829
_16430
AO353_16435: AO353_16435 - 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, at 3,648,967 to 3,650,001
_16435
AO353_16440: AO353_16440 - ArsC family transcriptional regulator, at 3,650,035 to 3,650,397
_16440
AO353_16445: AO353_16445 - succinyldiaminopimelate transaminase, at 3,650,622 to 3,651,821
_16445
Position (kb)
3648
3649
3650
3651 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 3648.057 kb on + strand, within AO353_16430 at 3648.057 kb on + strand, within AO353_16430 at 3648.058 kb on - strand, within AO353_16430 at 3648.058 kb on - strand, within AO353_16430 at 3648.058 kb on - strand, within AO353_16430 at 3648.129 kb on + strand, within AO353_16430 at 3648.129 kb on + strand, within AO353_16430 at 3648.129 kb on + strand, within AO353_16430 at 3648.129 kb on + strand, within AO353_16430 at 3648.129 kb on + strand, within AO353_16430 at 3648.130 kb on - strand, within AO353_16430 at 3648.130 kb on - strand, within AO353_16430 at 3648.130 kb on - strand, within AO353_16430 at 3648.130 kb on - strand, within AO353_16430 at 3648.156 kb on + strand, within AO353_16430 at 3648.157 kb on - strand, within AO353_16430 at 3648.157 kb on - strand, within AO353_16430 at 3648.180 kb on + strand, within AO353_16430 at 3648.181 kb on - strand, within AO353_16430 at 3648.528 kb on + strand, within AO353_16430 at 3648.528 kb on + strand, within AO353_16430 at 3648.696 kb on + strand, within AO353_16430 at 3648.696 kb on + strand, within AO353_16430 at 3648.697 kb on - strand, within AO353_16430 at 3648.697 kb on - strand, within AO353_16430 at 3648.697 kb on - strand, within AO353_16430 at 3648.699 kb on + strand, within AO353_16430 at 3648.699 kb on + strand, within AO353_16430 at 3648.699 kb on + strand, within AO353_16430 at 3648.699 kb on + strand, within AO353_16430 at 3648.699 kb on + strand, within AO353_16430 at 3648.699 kb on + strand, within AO353_16430 at 3648.699 kb on + strand, within AO353_16430 at 3648.700 kb on - strand, within AO353_16430 at 3648.759 kb on + strand at 3648.759 kb on + strand at 3648.759 kb on + strand at 3648.760 kb on - strand at 3648.760 kb on - strand at 3648.845 kb on + strand at 3648.845 kb on + strand at 3648.846 kb on - strand at 3648.861 kb on + strand at 3648.861 kb on + strand at 3648.861 kb on + strand at 3648.861 kb on + strand at 3648.861 kb on + strand at 3648.861 kb on + strand at 3648.862 kb on - strand at 3648.862 kb on - strand at 3648.862 kb on - strand at 3648.862 kb on - strand at 3648.862 kb on - strand at 3648.862 kb on - strand at 3648.875 kb on + strand at 3648.876 kb on - strand at 3648.876 kb on - strand at 3648.968 kb on + strand at 3648.968 kb on + strand at 3648.968 kb on + strand at 3648.968 kb on + strand at 3648.968 kb on + strand at 3648.968 kb on + strand at 3648.968 kb on + strand at 3648.968 kb on + strand at 3648.969 kb on - strand at 3648.969 kb on - strand at 3648.969 kb on - strand at 3648.969 kb on - strand at 3648.969 kb on - strand at 3648.969 kb on - strand at 3648.969 kb on - strand at 3648.969 kb on - strand at 3648.969 kb on - strand at 3648.969 kb on - strand at 3648.969 kb on - strand at 3648.969 kb on - strand at 3650.014 kb on - strand at 3650.036 kb on + strand at 3650.037 kb on - strand at 3650.037 kb on - strand at 3650.037 kb on - strand at 3650.037 kb on - strand at 3650.055 kb on - strand at 3650.055 kb on - strand at 3650.145 kb on + strand, within AO353_16440 at 3650.172 kb on + strand, within AO353_16440 at 3650.173 kb on - strand, within AO353_16440 at 3650.173 kb on - strand, within AO353_16440 at 3650.173 kb on - strand, within AO353_16440 at 3650.173 kb on - strand, within AO353_16440 at 3650.173 kb on - strand, within AO353_16440 at 3650.443 kb on + strand at 3650.443 kb on + strand at 3650.443 kb on + strand at 3650.443 kb on + strand at 3650.444 kb on - strand at 3650.444 kb on - strand at 3650.444 kb on - strand at 3650.444 kb on - strand at 3650.444 kb on - strand at 3650.444 kb on - strand at 3650.523 kb on + strand at 3650.523 kb on + strand at 3650.523 kb on + strand at 3650.524 kb on - strand at 3650.616 kb on + strand at 3650.616 kb on + strand at 3650.616 kb on + strand at 3650.616 kb on + strand at 3650.617 kb on - strand at 3650.617 kb on - strand at 3650.617 kb on - strand at 3650.617 kb on - strand at 3650.617 kb on - strand at 3650.617 kb on - strand at 3650.623 kb on + strand at 3650.623 kb on + strand at 3650.749 kb on + strand, within AO353_16445 at 3650.749 kb on + strand, within AO353_16445 at 3650.750 kb on - strand, within AO353_16445 at 3650.750 kb on - strand, within AO353_16445 at 3650.750 kb on - strand, within AO353_16445 at 3650.836 kb on + strand, within AO353_16445 at 3650.836 kb on + strand, within AO353_16445 at 3650.837 kb on - strand, within AO353_16445 at 3650.837 kb on - strand, within AO353_16445 at 3650.859 kb on + strand, within AO353_16445 at 3650.859 kb on + strand, within AO353_16445 at 3650.859 kb on + strand, within AO353_16445 at 3650.859 kb on + strand, within AO353_16445 at 3650.859 kb on + strand, within AO353_16445 at 3650.859 kb on + strand, within AO353_16445 at 3650.859 kb on + strand, within AO353_16445 at 3650.859 kb on + strand, within AO353_16445 at 3650.860 kb on - strand, within AO353_16445 at 3650.860 kb on - strand, within AO353_16445 at 3650.860 kb on - strand, within AO353_16445 at 3650.899 kb on + strand, within AO353_16445 at 3650.899 kb on + strand, within AO353_16445 at 3650.899 kb on + strand, within AO353_16445 at 3650.899 kb on + strand, within AO353_16445 at 3650.900 kb on - strand, within AO353_16445 at 3650.900 kb on - strand, within AO353_16445 at 3650.900 kb on - strand, within AO353_16445 at 3651.001 kb on + strand, within AO353_16445 at 3651.001 kb on + strand, within AO353_16445 at 3651.001 kb on + strand, within AO353_16445 at 3651.001 kb on + strand, within AO353_16445 at 3651.001 kb on + strand, within AO353_16445 at 3651.001 kb on + strand, within AO353_16445 at 3651.001 kb on + strand, within AO353_16445 at 3651.001 kb on + strand, within AO353_16445
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (N) remove 3,648,057 + AO353_16430 0.36 +1.1 3,648,057 + AO353_16430 0.36 -1.2 3,648,058 - AO353_16430 0.36 +1.8 3,648,058 - AO353_16430 0.36 -0.5 3,648,058 - AO353_16430 0.36 +0.9 3,648,129 + AO353_16430 0.42 +0.6 3,648,129 + AO353_16430 0.42 +0.5 3,648,129 + AO353_16430 0.42 -1.0 3,648,129 + AO353_16430 0.42 +1.3 3,648,129 + AO353_16430 0.42 +0.5 3,648,130 - AO353_16430 0.42 +1.2 3,648,130 - AO353_16430 0.42 +0.3 3,648,130 - AO353_16430 0.42 +0.1 3,648,130 - AO353_16430 0.42 +0.4 3,648,156 + AO353_16430 0.44 +0.1 3,648,157 - AO353_16430 0.44 -0.7 3,648,157 - AO353_16430 0.44 +0.5 3,648,180 + AO353_16430 0.46 -0.0 3,648,181 - AO353_16430 0.46 -0.4 3,648,528 + AO353_16430 0.75 -0.4 3,648,528 + AO353_16430 0.75 -0.4 3,648,696 + AO353_16430 0.89 -1.0 3,648,696 + AO353_16430 0.89 -0.5 3,648,697 - AO353_16430 0.89 -1.3 3,648,697 - AO353_16430 0.89 -0.5 3,648,697 - AO353_16430 0.89 +0.5 3,648,699 + AO353_16430 0.89 -0.1 3,648,699 + AO353_16430 0.89 -0.8 3,648,699 + AO353_16430 0.89 +1.1 3,648,699 + AO353_16430 0.89 -0.1 3,648,699 + AO353_16430 0.89 -0.3 3,648,699 + AO353_16430 0.89 +0.6 3,648,699 + AO353_16430 0.89 -0.5 3,648,700 - AO353_16430 0.89 +0.1 3,648,759 + -0.5 3,648,759 + +3.0 3,648,759 + -0.5 3,648,760 - -1.4 3,648,760 - -2.1 3,648,845 + -0.1 3,648,845 + -0.4 3,648,846 - -0.7 3,648,861 + -0.1 3,648,861 + +1.6 3,648,861 + -1.2 3,648,861 + -1.0 3,648,861 + -0.5 3,648,861 + -1.1 3,648,862 - -1.0 3,648,862 - +0.7 3,648,862 - -0.1 3,648,862 - -0.3 3,648,862 - -0.5 3,648,862 - -0.5 3,648,875 + -0.3 3,648,876 - -0.4 3,648,876 - -2.1 3,648,968 + -0.9 3,648,968 + -1.4 3,648,968 + +0.5 3,648,968 + +0.7 3,648,968 + -0.0 3,648,968 + -0.4 3,648,968 + +0.1 3,648,968 + +1.0 3,648,969 - -0.5 3,648,969 - +0.1 3,648,969 - +0.8 3,648,969 - +0.3 3,648,969 - +0.2 3,648,969 - -0.5 3,648,969 - -1.1 3,648,969 - +0.4 3,648,969 - -1.5 3,648,969 - -0.5 3,648,969 - +0.5 3,648,969 - -1.2 3,650,014 - +0.8 3,650,036 + -1.4 3,650,037 - +0.9 3,650,037 - +0.6 3,650,037 - -1.1 3,650,037 - -0.3 3,650,055 - +1.5 3,650,055 - -0.2 3,650,145 + AO353_16440 0.30 -1.5 3,650,172 + AO353_16440 0.38 -2.0 3,650,173 - AO353_16440 0.38 -0.2 3,650,173 - AO353_16440 0.38 +0.7 3,650,173 - AO353_16440 0.38 -2.7 3,650,173 - AO353_16440 0.38 +0.5 3,650,173 - AO353_16440 0.38 -1.6 3,650,443 + -0.9 3,650,443 + -2.1 3,650,443 + -2.4 3,650,443 + -1.8 3,650,444 - +0.7 3,650,444 - -1.9 3,650,444 - +1.5 3,650,444 - -0.3 3,650,444 - +0.8 3,650,444 - -0.1 3,650,523 + -1.5 3,650,523 + -1.9 3,650,523 + -0.1 3,650,524 - -1.9 3,650,616 + +0.4 3,650,616 + +0.0 3,650,616 + +1.5 3,650,616 + +0.0 3,650,617 - -0.1 3,650,617 - +1.5 3,650,617 - -0.4 3,650,617 - +0.5 3,650,617 - +0.9 3,650,617 - +0.6 3,650,623 + +0.1 3,650,623 + +0.6 3,650,749 + AO353_16445 0.11 +0.5 3,650,749 + AO353_16445 0.11 -0.3 3,650,750 - AO353_16445 0.11 -0.2 3,650,750 - AO353_16445 0.11 +0.7 3,650,750 - AO353_16445 0.11 -0.3 3,650,836 + AO353_16445 0.18 +0.5 3,650,836 + AO353_16445 0.18 +0.0 3,650,837 - AO353_16445 0.18 +0.4 3,650,837 - AO353_16445 0.18 -0.1 3,650,859 + AO353_16445 0.20 -0.1 3,650,859 + AO353_16445 0.20 -0.4 3,650,859 + AO353_16445 0.20 -1.1 3,650,859 + AO353_16445 0.20 -0.3 3,650,859 + AO353_16445 0.20 -0.4 3,650,859 + AO353_16445 0.20 -0.6 3,650,859 + AO353_16445 0.20 -1.4 3,650,859 + AO353_16445 0.20 -0.5 3,650,860 - AO353_16445 0.20 -0.5 3,650,860 - AO353_16445 0.20 -0.5 3,650,860 - AO353_16445 0.20 -2.0 3,650,899 + AO353_16445 0.23 +0.2 3,650,899 + AO353_16445 0.23 -0.1 3,650,899 + AO353_16445 0.23 -0.5 3,650,899 + AO353_16445 0.23 +1.1 3,650,900 - AO353_16445 0.23 +1.2 3,650,900 - AO353_16445 0.23 -1.2 3,650,900 - AO353_16445 0.23 -2.6 3,651,001 + AO353_16445 0.32 -0.2 3,651,001 + AO353_16445 0.32 +0.1 3,651,001 + AO353_16445 0.32 -2.4 3,651,001 + AO353_16445 0.32 +0.2 3,651,001 + AO353_16445 0.32 -0.9 3,651,001 + AO353_16445 0.32 +0.5 3,651,001 + AO353_16445 0.32 -0.4 3,651,001 + AO353_16445 0.32 +0.3
Or see this region's nucleotide sequence