Experiment: L-Glutamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_10495 and AO353_10500 are separated by 36 nucleotides AO353_10500 and AO353_10505 are separated by 53 nucleotides AO353_10505 and AO353_10510 overlap by 1 nucleotides
AO353_10495: AO353_10495 - serine hydroxymethyltransferase, at 2,302,140 to 2,303,405
_10495
AO353_10500: AO353_10500 - acetylornithine aminotransferase, at 2,303,442 to 2,304,614
_10500
AO353_10505: AO353_10505 - hypothetical protein, at 2,304,668 to 2,305,486
_10505
AO353_10510: AO353_10510 - benzoate transporter, at 2,305,486 to 2,306,736
_10510
Position (kb)
2303
2304
2305 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2302.544 kb on - strand, within AO353_10495 at 2302.733 kb on + strand, within AO353_10495 at 2302.733 kb on + strand, within AO353_10495 at 2302.873 kb on + strand, within AO353_10495 at 2302.907 kb on + strand, within AO353_10495 at 2302.987 kb on + strand, within AO353_10495 at 2302.987 kb on + strand, within AO353_10495 at 2302.987 kb on + strand, within AO353_10495 at 2302.987 kb on + strand, within AO353_10495 at 2302.987 kb on + strand, within AO353_10495 at 2302.988 kb on - strand, within AO353_10495 at 2302.988 kb on - strand, within AO353_10495 at 2303.198 kb on - strand, within AO353_10495 at 2303.213 kb on - strand, within AO353_10495 at 2303.242 kb on + strand, within AO353_10495 at 2303.293 kb on + strand at 2303.345 kb on + strand at 2303.345 kb on + strand at 2303.401 kb on + strand at 2303.401 kb on + strand at 2303.402 kb on - strand at 2303.433 kb on + strand at 2303.434 kb on - strand at 2303.434 kb on - strand at 2303.434 kb on - strand at 2303.434 kb on - strand at 2303.434 kb on - strand at 2303.443 kb on + strand at 2303.443 kb on + strand at 2303.544 kb on + strand at 2303.545 kb on - strand at 2303.545 kb on - strand at 2303.545 kb on - strand at 2303.545 kb on - strand at 2303.545 kb on - strand at 2303.550 kb on + strand at 2303.551 kb on - strand at 2303.551 kb on - strand at 2303.551 kb on - strand at 2303.746 kb on - strand, within AO353_10500 at 2304.012 kb on + strand, within AO353_10500 at 2304.012 kb on + strand, within AO353_10500 at 2304.012 kb on + strand, within AO353_10500 at 2304.012 kb on + strand, within AO353_10500 at 2304.012 kb on + strand, within AO353_10500 at 2304.012 kb on + strand, within AO353_10500 at 2304.013 kb on - strand, within AO353_10500 at 2304.013 kb on - strand, within AO353_10500 at 2304.013 kb on - strand, within AO353_10500 at 2304.013 kb on - strand, within AO353_10500 at 2304.128 kb on - strand, within AO353_10500 at 2304.128 kb on - strand, within AO353_10500 at 2304.138 kb on + strand, within AO353_10500 at 2304.139 kb on - strand, within AO353_10500 at 2304.174 kb on + strand, within AO353_10500 at 2304.511 kb on + strand at 2304.512 kb on - strand at 2304.512 kb on - strand at 2304.512 kb on - strand at 2304.512 kb on - strand at 2304.512 kb on - strand at 2304.580 kb on + strand at 2304.580 kb on + strand at 2304.581 kb on - strand at 2304.581 kb on - strand at 2304.581 kb on - strand at 2304.581 kb on - strand at 2304.581 kb on - strand at 2304.581 kb on - strand at 2304.581 kb on - strand at 2304.581 kb on - strand at 2304.581 kb on - strand at 2304.581 kb on - strand at 2304.581 kb on - strand at 2304.581 kb on - strand at 2304.581 kb on - strand at 2304.581 kb on - strand at 2304.581 kb on - strand at 2304.581 kb on - strand at 2304.581 kb on - strand at 2304.581 kb on - strand at 2304.596 kb on - strand at 2304.596 kb on - strand at 2304.596 kb on - strand at 2304.596 kb on - strand at 2304.630 kb on - strand at 2304.649 kb on + strand at 2304.649 kb on + strand at 2304.649 kb on + strand at 2304.649 kb on + strand at 2304.649 kb on + strand at 2304.650 kb on - strand at 2304.650 kb on - strand at 2304.650 kb on - strand at 2304.650 kb on - strand at 2304.650 kb on - strand at 2304.650 kb on - strand at 2304.650 kb on - strand at 2304.650 kb on - strand at 2304.650 kb on - strand at 2304.650 kb on - strand at 2304.650 kb on - strand at 2304.650 kb on - strand at 2304.650 kb on - strand at 2304.650 kb on - strand at 2304.650 kb on - strand at 2304.670 kb on - strand at 2304.709 kb on - strand at 2304.709 kb on - strand at 2304.709 kb on - strand at 2304.709 kb on - strand at 2304.709 kb on - strand at 2304.711 kb on + strand at 2304.712 kb on - strand at 2304.712 kb on - strand at 2304.712 kb on - strand at 2304.712 kb on - strand at 2304.881 kb on + strand, within AO353_10505 at 2304.882 kb on - strand, within AO353_10505 at 2304.882 kb on - strand, within AO353_10505 at 2304.882 kb on - strand, within AO353_10505 at 2304.976 kb on - strand, within AO353_10505 at 2304.976 kb on - strand, within AO353_10505 at 2305.012 kb on - strand, within AO353_10505 at 2305.012 kb on - strand, within AO353_10505 at 2305.033 kb on + strand, within AO353_10505 at 2305.034 kb on - strand, within AO353_10505 at 2305.034 kb on - strand, within AO353_10505 at 2305.034 kb on - strand, within AO353_10505 at 2305.260 kb on - strand, within AO353_10505
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (N) remove 2,302,544 - AO353_10495 0.32 -1.4 2,302,733 + AO353_10495 0.47 -2.2 2,302,733 + AO353_10495 0.47 +0.1 2,302,873 + AO353_10495 0.58 +0.9 2,302,907 + AO353_10495 0.61 -0.4 2,302,987 + AO353_10495 0.67 -0.1 2,302,987 + AO353_10495 0.67 -1.9 2,302,987 + AO353_10495 0.67 +0.9 2,302,987 + AO353_10495 0.67 -1.1 2,302,987 + AO353_10495 0.67 -1.2 2,302,988 - AO353_10495 0.67 -2.4 2,302,988 - AO353_10495 0.67 -0.9 2,303,198 - AO353_10495 0.84 +0.9 2,303,213 - AO353_10495 0.85 +1.1 2,303,242 + AO353_10495 0.87 -0.7 2,303,293 + +0.6 2,303,345 + -1.0 2,303,345 + -1.4 2,303,401 + -1.6 2,303,401 + -0.4 2,303,402 - +0.1 2,303,433 + -0.1 2,303,434 - -0.6 2,303,434 - -0.6 2,303,434 - -0.3 2,303,434 - +0.2 2,303,434 - -1.4 2,303,443 + +1.6 2,303,443 + -1.0 2,303,544 + -1.3 2,303,545 - +0.8 2,303,545 - +0.3 2,303,545 - -1.2 2,303,545 - -0.6 2,303,545 - -1.6 2,303,550 + +0.0 2,303,551 - -0.4 2,303,551 - -2.2 2,303,551 - -0.7 2,303,746 - AO353_10500 0.26 -0.3 2,304,012 + AO353_10500 0.49 -0.7 2,304,012 + AO353_10500 0.49 +1.3 2,304,012 + AO353_10500 0.49 -0.9 2,304,012 + AO353_10500 0.49 -0.4 2,304,012 + AO353_10500 0.49 -0.4 2,304,012 + AO353_10500 0.49 -0.9 2,304,013 - AO353_10500 0.49 +2.5 2,304,013 - AO353_10500 0.49 -1.9 2,304,013 - AO353_10500 0.49 +0.6 2,304,013 - AO353_10500 0.49 -2.2 2,304,128 - AO353_10500 0.58 -2.4 2,304,128 - AO353_10500 0.58 +0.3 2,304,138 + AO353_10500 0.59 +0.4 2,304,139 - AO353_10500 0.59 -1.6 2,304,174 + AO353_10500 0.62 -0.1 2,304,511 + -1.3 2,304,512 - -2.0 2,304,512 - -2.2 2,304,512 - -2.2 2,304,512 - +0.4 2,304,512 - +0.7 2,304,580 + -0.9 2,304,580 + -2.2 2,304,581 - +0.5 2,304,581 - -0.8 2,304,581 - -1.4 2,304,581 - -1.1 2,304,581 - -1.8 2,304,581 - -0.0 2,304,581 - -0.7 2,304,581 - +0.9 2,304,581 - +0.1 2,304,581 - -0.9 2,304,581 - -0.1 2,304,581 - -2.8 2,304,581 - -0.1 2,304,581 - -0.3 2,304,581 - +0.1 2,304,581 - -0.7 2,304,581 - -2.4 2,304,581 - -1.9 2,304,596 - -0.2 2,304,596 - -0.3 2,304,596 - -0.3 2,304,596 - +0.1 2,304,630 - -1.0 2,304,649 + -0.7 2,304,649 + -0.1 2,304,649 + -0.7 2,304,649 + -0.6 2,304,649 + -1.4 2,304,650 - -0.7 2,304,650 - +0.1 2,304,650 - -0.7 2,304,650 - +0.4 2,304,650 - +1.5 2,304,650 - -1.4 2,304,650 - -0.6 2,304,650 - -0.4 2,304,650 - +0.5 2,304,650 - -0.4 2,304,650 - +1.0 2,304,650 - +0.3 2,304,650 - +1.2 2,304,650 - +0.7 2,304,650 - -0.1 2,304,670 - -0.9 2,304,709 - +0.6 2,304,709 - -0.9 2,304,709 - -1.1 2,304,709 - -0.5 2,304,709 - +0.4 2,304,711 + -2.3 2,304,712 - -0.1 2,304,712 - +0.2 2,304,712 - +0.8 2,304,712 - -0.7 2,304,881 + AO353_10505 0.26 +1.3 2,304,882 - AO353_10505 0.26 +0.1 2,304,882 - AO353_10505 0.26 -2.3 2,304,882 - AO353_10505 0.26 +0.4 2,304,976 - AO353_10505 0.38 -1.8 2,304,976 - AO353_10505 0.38 +1.7 2,305,012 - AO353_10505 0.42 -0.9 2,305,012 - AO353_10505 0.42 -1.2 2,305,033 + AO353_10505 0.45 -0.1 2,305,034 - AO353_10505 0.45 -0.1 2,305,034 - AO353_10505 0.45 +0.1 2,305,034 - AO353_10505 0.45 +0.6 2,305,260 - AO353_10505 0.72 -0.9
Or see this region's nucleotide sequence