Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS08820

Experiment: Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB
1,871,396	-		ABZR87_RS08815	0.14	-0.8
1,871,396	-		ABZR87_RS08815	0.14	-0.8
1,871,396	-		ABZR87_RS08815	0.14	-0.3
1,871,430	+		ABZR87_RS08815	0.19	-0.6
1,871,430	+		ABZR87_RS08815	0.19	-0.4
1,871,430	+		ABZR87_RS08815	0.19	-0.5
1,871,431	-		ABZR87_RS08815	0.19	-0.9
1,871,431	-		ABZR87_RS08815	0.19	+1.4
1,871,431	-		ABZR87_RS08815	0.19	-0.4
1,871,439	+		ABZR87_RS08815	0.20	+0.8
1,871,440	-		ABZR87_RS08815	0.21	+0.4
1,871,440	-		ABZR87_RS08815	0.21	+0.0
1,871,440	-		ABZR87_RS08815	0.21	-1.0
1,871,440	-		ABZR87_RS08815	0.21	-0.7
1,871,582	+		ABZR87_RS08815	0.42	+1.1
1,871,583	-		ABZR87_RS08815	0.43	+0.4
1,871,583	-		ABZR87_RS08815	0.43	-0.2
1,871,583	-		ABZR87_RS08815	0.43	-1.7
1,871,583	-		ABZR87_RS08815	0.43	+2.3
1,871,643	+		ABZR87_RS08815	0.52	-1.6
1,871,644	-		ABZR87_RS08815	0.52	-0.5
1,871,644	-		ABZR87_RS08815	0.52	-0.6
1,871,644	-		ABZR87_RS08815	0.52	+0.2
1,871,644	-		ABZR87_RS08815	0.52	+0.4
1,871,644	-		ABZR87_RS08815	0.52	+0.7
1,871,644	-		ABZR87_RS08815	0.52	-1.4
1,871,644	-		ABZR87_RS08815	0.52	+1.4
1,871,681	+		ABZR87_RS08815	0.58	-0.4
1,871,681	+		ABZR87_RS08815	0.58	+0.9
1,871,681	+		ABZR87_RS08815	0.58	-0.2
1,871,681	+		ABZR87_RS08815	0.58	+0.2
1,871,682	-		ABZR87_RS08815	0.58	-0.1
1,871,682	-		ABZR87_RS08815	0.58	+0.7
1,871,682	-		ABZR87_RS08815	0.58	-0.2
1,871,682	-		ABZR87_RS08815	0.58	-1.0
1,871,750	-		ABZR87_RS08815	0.68	-0.7
1,871,804	-		ABZR87_RS08815	0.76	-0.7
1,871,854	+		ABZR87_RS08815	0.84	+0.9
1,871,855	-		ABZR87_RS08815	0.84	+0.6
1,871,855	-		ABZR87_RS08815	0.84	+0.4
1,871,913	+				+0.2
1,871,914	-				-0.2
1,871,914	-				+0.2
1,871,914	-				+0.2
1,871,916	+				-3.4
1,871,917	-				+0.1
1,871,917	-				-1.4
1,871,917	-				-0.1
1,871,926	+				-0.7
1,871,927	-				-0.9
1,872,001	+				+0.1
1,872,001	+				+0.4
1,872,002	-				-0.7
1,872,059	+				+0.4
1,872,059	+				+0.2
1,872,059	+				+2.2
1,872,059	+				-2.2
1,872,059	+				-1.5
1,872,059	+				-1.7
1,872,059	+				+1.9
1,872,059	+				-0.3
1,872,059	+				+0.7
1,872,059	+				-1.3
1,872,060	-				-0.4
1,872,060	-				-1.2
1,872,060	-				+0.1
1,872,060	-				+0.4
1,872,060	-				-2.1
1,872,060	-				-0.3
1,872,085	+				+1.1
1,872,085	+				+0.9
1,872,086	-				-1.1
1,872,086	-				-1.4
1,872,086	-				+1.1
1,872,086	-				+0.6
1,872,092	+				-0.4
1,872,092	+				-0.6
1,872,093	-				-0.4
1,872,093	-				-0.3
1,872,120	-				+0.6
1,872,120	-				-0.5
1,872,148	+				+3.0
1,872,149	-				-0.6
1,872,149	-				-0.5
1,872,149	-				+4.0
1,872,156	-				-1.6
1,872,156	-				-1.0
1,872,238	+				-0.2
1,872,238	+				-0.6
1,872,238	+				-1.1
1,872,238	+				-0.3
1,872,238	+				-1.1
1,872,238	+				-0.3
1,872,239	-				-2.0
1,872,239	-				+0.4
1,872,239	-				-0.4
1,872,239	-				+0.3
1,872,292	-				+0.0
1,872,301	+				+0.9
1,872,301	+				-0.1
1,872,302	-				-0.8
1,872,302	-				+0.0
1,872,302	-				-0.2
1,872,302	-				-0.4
1,872,475	+		ABZR87_RS08820	0.32	-0.6
1,872,475	+		ABZR87_RS08820	0.32	-0.1
1,872,475	+		ABZR87_RS08820	0.32	-0.4
1,872,476	-		ABZR87_RS08820	0.33	-0.6
1,872,476	-		ABZR87_RS08820	0.33	-1.3
1,872,476	-		ABZR87_RS08820	0.33	-0.3
1,872,476	-		ABZR87_RS08820	0.33	-1.0
1,872,476	-		ABZR87_RS08820	0.33	-0.2
1,872,511	+		ABZR87_RS08820	0.39	+0.4
1,872,512	-		ABZR87_RS08820	0.40	+0.4
1,872,535	+		ABZR87_RS08820	0.44	-0.7
1,872,535	+		ABZR87_RS08820	0.44	-0.3
1,872,535	+		ABZR87_RS08820	0.44	+0.1
1,872,535	+		ABZR87_RS08820	0.44	+0.3
1,872,535	+		ABZR87_RS08820	0.44	+2.3
1,872,536	-		ABZR87_RS08820	0.44	+1.6
1,872,536	-		ABZR87_RS08820	0.44	-1.8
1,872,536	-		ABZR87_RS08820	0.44	+0.6
1,872,536	-		ABZR87_RS08820	0.44	+0.8
1,872,617	+		ABZR87_RS08820	0.60	+0.3
1,872,618	-		ABZR87_RS08820	0.60	+1.5
1,872,618	-		ABZR87_RS08820	0.60	+1.6
1,872,646	+		ABZR87_RS08820	0.66	-0.4
1,872,646	+		ABZR87_RS08820	0.66	-0.6
1,872,646	+		ABZR87_RS08820	0.66	+0.5
1,872,647	-		ABZR87_RS08820	0.66	+0.5
1,872,673	+		ABZR87_RS08820	0.71	+0.4
1,872,674	-		ABZR87_RS08820	0.71	-0.5
1,872,815	+				-0.9
1,872,816	-				+0.6
1,872,816	-				-0.3
1,872,859	+				+0.3
1,872,860	-				+1.3
1,872,860	-				+0.2
1,872,860	-				-0.6
1,872,877	+				-3.2
1,872,877	+				-0.2
1,872,878	-				+0.1
1,872,878	-				-3.0
1,872,886	-				-1.2
1,872,886	-				-0.2
1,872,889	-				-0.9
1,872,897	+				-0.2
1,873,019	-				-0.0
1,873,333	+		ABZR87_RS08825	0.42	-0.4
1,873,333	+		ABZR87_RS08825	0.42	+0.5
1,873,334	-		ABZR87_RS08825	0.43	+2.4
1,873,334	-		ABZR87_RS08825	0.43	-0.4
1,873,334	-		ABZR87_RS08825	0.43	+0.5
1,873,334	-		ABZR87_RS08825	0.43	+0.3
1,873,495	+		ABZR87_RS08825	0.60	-0.5
1,873,496	-		ABZR87_RS08825	0.60	+1.0
1,873,496	-		ABZR87_RS08825	0.60	+0.2
1,873,693	+		ABZR87_RS08825	0.81	-1.9
1,873,693	+		ABZR87_RS08825	0.81	-2.1
1,873,693	+		ABZR87_RS08825	0.81	+2.4
1,873,719	+		ABZR87_RS08825	0.84	-0.3
1,873,720	-		ABZR87_RS08825	0.84	+0.2