Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS08710

Experiment: Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB
1,850,263	+		ABZR87_RS08705	0.21	-2.0
1,850,264	-		ABZR87_RS08705	0.21	-0.7
1,850,264	-		ABZR87_RS08705	0.21	+2.9
1,850,268	+		ABZR87_RS08705	0.21	+0.3
1,850,268	+		ABZR87_RS08705	0.21	-1.5
1,850,268	+		ABZR87_RS08705	0.21	-2.9
1,850,269	-		ABZR87_RS08705	0.21	-1.4
1,850,269	-		ABZR87_RS08705	0.21	-1.8
1,850,269	-		ABZR87_RS08705	0.21	+0.3
1,850,269	-		ABZR87_RS08705	0.21	-0.5
1,850,269	-		ABZR87_RS08705	0.21	-2.8
1,850,293	+		ABZR87_RS08705	0.23	-3.0
1,850,293	+		ABZR87_RS08705	0.23	+0.7
1,850,294	-		ABZR87_RS08705	0.23	-2.1
1,850,334	+		ABZR87_RS08705	0.26	-1.5
1,850,335	-		ABZR87_RS08705	0.26	-2.1
1,850,335	-		ABZR87_RS08705	0.26	-2.4
1,850,335	-		ABZR87_RS08705	0.26	-2.7
1,850,340	+		ABZR87_RS08705	0.27	-0.8
1,850,340	+		ABZR87_RS08705	0.27	-1.8
1,850,341	-		ABZR87_RS08705	0.27	+0.6
1,850,341	-		ABZR87_RS08705	0.27	-1.5
1,850,359	+		ABZR87_RS08705	0.28	-1.5
1,850,359	+		ABZR87_RS08705	0.28	-0.8
1,850,359	+		ABZR87_RS08705	0.28	-1.2
1,850,360	-		ABZR87_RS08705	0.28	-0.1
1,850,360	-		ABZR87_RS08705	0.28	-0.6
1,850,379	-		ABZR87_RS08705	0.30	-0.9
1,850,379	-		ABZR87_RS08705	0.30	+0.3
1,850,379	-		ABZR87_RS08705	0.30	-3.0
1,850,409	+		ABZR87_RS08705	0.32	-0.6
1,850,409	+		ABZR87_RS08705	0.32	-1.1
1,850,409	+		ABZR87_RS08705	0.32	-2.8
1,850,409	+		ABZR87_RS08705	0.32	-1.7
1,850,409	+		ABZR87_RS08705	0.32	-0.8
1,850,410	-		ABZR87_RS08705	0.32	-2.5
1,850,423	+		ABZR87_RS08705	0.33	-1.1
1,850,423	+		ABZR87_RS08705	0.33	+0.3
1,850,423	+		ABZR87_RS08705	0.33	-0.1
1,850,423	+		ABZR87_RS08705	0.33	-1.2
1,850,423	+		ABZR87_RS08705	0.33	-4.2
1,850,423	+		ABZR87_RS08705	0.33	+0.5
1,850,423	+		ABZR87_RS08705	0.33	+1.9
1,850,423	+		ABZR87_RS08705	0.33	-0.8
1,850,423	+		ABZR87_RS08705	0.33	-1.3
1,850,424	-		ABZR87_RS08705	0.34	-0.8
1,850,424	-		ABZR87_RS08705	0.34	-0.6
1,850,424	-		ABZR87_RS08705	0.34	-0.3
1,850,424	-		ABZR87_RS08705	0.34	+1.3
1,850,424	-		ABZR87_RS08705	0.34	-0.3
1,850,424	-		ABZR87_RS08705	0.34	+0.1
1,850,424	-		ABZR87_RS08705	0.34	-1.7
1,850,424	-		ABZR87_RS08705	0.34	-0.1
1,850,424	-		ABZR87_RS08705	0.34	+0.6
1,850,435	+		ABZR87_RS08705	0.34	-0.9
1,850,476	+		ABZR87_RS08705	0.38	-0.1
1,850,476	+		ABZR87_RS08705	0.38	-0.7
1,850,476	+		ABZR87_RS08705	0.38	+0.9
1,850,476	+		ABZR87_RS08705	0.38	-1.5
1,850,476	+		ABZR87_RS08705	0.38	-0.9
1,850,477	-		ABZR87_RS08705	0.38	-1.9
1,850,477	-		ABZR87_RS08705	0.38	-0.4
1,850,477	-		ABZR87_RS08705	0.38	-0.3
1,850,477	-		ABZR87_RS08705	0.38	-0.3
1,850,477	-		ABZR87_RS08705	0.38	+1.0
1,850,482	+		ABZR87_RS08705	0.38	-0.5
1,850,482	+		ABZR87_RS08705	0.38	+1.3
1,850,482	+		ABZR87_RS08705	0.38	+0.3
1,850,482	+		ABZR87_RS08705	0.38	-0.8
1,850,483	-		ABZR87_RS08705	0.38	-1.3
1,850,518	+		ABZR87_RS08705	0.41	-1.1
1,850,519	-		ABZR87_RS08705	0.41	-0.9
1,850,519	-		ABZR87_RS08705	0.41	-0.4
1,850,536	+		ABZR87_RS08705	0.43	-2.6
1,850,536	+		ABZR87_RS08705	0.43	-1.2
1,850,536	+		ABZR87_RS08705	0.43	-0.8
1,850,536	+		ABZR87_RS08705	0.43	-0.2
1,850,537	-		ABZR87_RS08705	0.43	-0.4
1,850,537	-		ABZR87_RS08705	0.43	-1.3
1,850,537	-		ABZR87_RS08705	0.43	-2.7
1,850,603	+		ABZR87_RS08705	0.48	-1.2
1,850,603	+		ABZR87_RS08705	0.48	-1.1
1,850,603	+		ABZR87_RS08705	0.48	-2.0
1,850,603	+		ABZR87_RS08705	0.48	-1.3
1,850,603	+		ABZR87_RS08705	0.48	-0.9
1,850,603	+		ABZR87_RS08705	0.48	-1.3
1,850,604	-		ABZR87_RS08705	0.48	+0.6
1,850,604	-		ABZR87_RS08705	0.48	+0.2
1,850,604	-		ABZR87_RS08705	0.48	-0.1
1,850,604	-		ABZR87_RS08705	0.48	-0.6
1,850,604	-		ABZR87_RS08705	0.48	-1.6
1,850,699	+		ABZR87_RS08705	0.56	-1.8
1,850,699	+		ABZR87_RS08705	0.56	+0.1
1,850,700	-		ABZR87_RS08705	0.56	-1.1
1,850,700	-		ABZR87_RS08705	0.56	+0.5
1,850,881	+		ABZR87_RS08705	0.71	-0.2
1,850,881	+		ABZR87_RS08705	0.71	+0.3
1,850,881	+		ABZR87_RS08705	0.71	-0.8
1,850,882	-		ABZR87_RS08705	0.71	+2.9
1,850,882	-		ABZR87_RS08705	0.71	-2.6
1,850,882	-		ABZR87_RS08705	0.71	+0.3
1,850,882	-		ABZR87_RS08705	0.71	-0.7
1,850,882	-		ABZR87_RS08705	0.71	-1.8
1,850,885	+		ABZR87_RS08705	0.71	-0.9
1,850,885	+		ABZR87_RS08705	0.71	+2.9
1,850,885	+		ABZR87_RS08705	0.71	-0.7
1,850,885	+		ABZR87_RS08705	0.71	-1.8
1,850,885	+		ABZR87_RS08705	0.71	+0.6
1,850,885	+		ABZR87_RS08705	0.71	+1.6
1,850,885	+		ABZR87_RS08705	0.71	-0.0
1,850,885	+		ABZR87_RS08705	0.71	-1.5
1,850,885	+		ABZR87_RS08705	0.71	+0.5
1,850,885	+		ABZR87_RS08705	0.71	-0.5
1,850,885	+		ABZR87_RS08705	0.71	-0.3
1,850,885	+		ABZR87_RS08705	0.71	-2.1
1,850,885	+		ABZR87_RS08705	0.71	-0.1
1,850,885	+		ABZR87_RS08705	0.71	-3.5
1,850,885	+		ABZR87_RS08705	0.71	-1.0
1,850,886	-		ABZR87_RS08705	0.71	-0.7
1,850,886	-		ABZR87_RS08705	0.71	+1.3
1,850,886	-		ABZR87_RS08705	0.71	+0.2
1,850,886	-		ABZR87_RS08705	0.71	-0.7
1,850,886	-		ABZR87_RS08705	0.71	+0.2
1,850,886	-		ABZR87_RS08705	0.71	-0.6
1,850,886	-		ABZR87_RS08705	0.71	-0.5
1,850,886	-		ABZR87_RS08705	0.71	+0.2
1,850,886	-		ABZR87_RS08705	0.71	-0.3
1,850,886	-		ABZR87_RS08705	0.71	-2.9
1,850,890	+		ABZR87_RS08705	0.71	-2.9
1,850,891	-		ABZR87_RS08705	0.71	-0.5
1,850,891	-		ABZR87_RS08705	0.71	+1.4
1,850,927	+		ABZR87_RS08705	0.74	-0.2
1,850,928	-		ABZR87_RS08705	0.74	-2.3
1,850,928	-		ABZR87_RS08705	0.74	+1.9
1,850,928	-		ABZR87_RS08705	0.74	-2.4
1,850,973	+		ABZR87_RS08705	0.78	-0.9
1,850,973	+		ABZR87_RS08705	0.78	-1.7
1,850,973	+		ABZR87_RS08705	0.78	-0.2
1,850,973	+		ABZR87_RS08705	0.78	-0.1
1,850,973	+		ABZR87_RS08705	0.78	-1.6
1,850,973	+		ABZR87_RS08705	0.78	-0.8
1,850,973	+		ABZR87_RS08705	0.78	-0.7
1,850,973	+		ABZR87_RS08705	0.78	-0.9
1,850,973	+		ABZR87_RS08705	0.78	-2.2
1,850,973	+		ABZR87_RS08705	0.78	-1.9
1,850,973	+		ABZR87_RS08705	0.78	+0.8
1,850,973	+		ABZR87_RS08705	0.78	-1.2
1,850,973	+		ABZR87_RS08705	0.78	-0.8
1,850,973	+		ABZR87_RS08705	0.78	+0.1
1,850,973	+		ABZR87_RS08705	0.78	-0.9
1,850,973	+		ABZR87_RS08705	0.78	+0.1
1,850,973	+		ABZR87_RS08705	0.78	+0.7
1,850,973	+		ABZR87_RS08705	0.78	-0.9
1,850,973	+		ABZR87_RS08705	0.78	-1.3
1,850,973	+		ABZR87_RS08705	0.78	-1.8
1,850,973	+		ABZR87_RS08705	0.78	-2.8
1,850,973	+		ABZR87_RS08705	0.78	-1.3
1,850,973	+		ABZR87_RS08705	0.78	-0.9
1,850,974	-		ABZR87_RS08705	0.78	-0.5
1,850,974	-		ABZR87_RS08705	0.78	-1.4
1,850,974	-		ABZR87_RS08705	0.78	-0.4
1,850,974	-		ABZR87_RS08705	0.78	+0.1
1,850,974	-		ABZR87_RS08705	0.78	-1.6
1,850,974	-		ABZR87_RS08705	0.78	-1.9
1,850,974	-		ABZR87_RS08705	0.78	-0.4
1,850,974	-		ABZR87_RS08705	0.78	-0.7
1,850,974	-		ABZR87_RS08705	0.78	-1.4
1,850,974	-		ABZR87_RS08705	0.78	-0.4
1,850,974	-		ABZR87_RS08705	0.78	-1.3
1,850,974	-		ABZR87_RS08705	0.78	+1.3
1,850,974	-		ABZR87_RS08705	0.78	-0.9
1,850,974	-		ABZR87_RS08705	0.78	-0.8
1,850,983	+		ABZR87_RS08705	0.79	-1.4
1,850,984	-		ABZR87_RS08705	0.79	-1.3
1,851,080	+		ABZR87_RS08705	0.87	-2.5
1,851,081	-		ABZR87_RS08705	0.87	-0.9
1,851,081	-		ABZR87_RS08705	0.87	+0.8
1,851,081	-		ABZR87_RS08705	0.87	-0.6
1,851,081	-		ABZR87_RS08705	0.87	-0.7
1,851,081	-		ABZR87_RS08705	0.87	-1.7
1,851,081	-		ABZR87_RS08705	0.87	-0.0
1,851,156	+				-0.6
1,851,156	+				-2.4
1,851,156	+				+0.3
1,851,156	+				+0.9
1,851,156	+				-0.8
1,851,156	+				-2.7
1,851,157	-				+0.2
1,851,157	-				-1.2
1,851,157	-				-0.9
1,851,157	-				-0.7
1,851,157	-				-1.1
1,851,157	-				-2.0
1,851,157	-				-0.4
1,851,157	-				+0.5
1,851,157	-				-1.2
1,851,157	-				-0.4
1,851,157	-				-3.1
1,851,157	-				-1.8
1,851,159	+				+0.7
1,851,160	-				-1.5
1,851,178	+				-1.1
1,851,178	+				-1.6
1,851,179	-				-0.2
1,851,212	+				-1.9
1,851,212	+				+1.9
1,851,213	-				-0.2
1,851,213	-				+0.5
1,851,213	-				-2.0
1,851,213	-				-1.0
1,851,273	+				-1.1
1,851,273	+				-2.1
1,851,274	-				-0.3
1,851,274	-				+0.2
1,851,274	-				-1.3
1,851,490	+		ABZR87_RS08710	0.41	-1.9
1,851,490	+		ABZR87_RS08710	0.41	-3.7
1,851,491	-		ABZR87_RS08710	0.41	-1.2
1,851,491	-		ABZR87_RS08710	0.41	-0.2
1,851,491	-		ABZR87_RS08710	0.41	-1.2
1,851,491	-		ABZR87_RS08710	0.41	-0.9
1,851,491	-		ABZR87_RS08710	0.41	-2.2
1,851,539	-		ABZR87_RS08710	0.49	-0.3
1,851,539	-		ABZR87_RS08710	0.49	-0.8
1,851,539	-		ABZR87_RS08710	0.49	-2.8
1,851,547	-		ABZR87_RS08710	0.50	-0.8
1,851,547	-		ABZR87_RS08710	0.50	-2.8
1,851,547	-		ABZR87_RS08710	0.50	-0.7
1,851,547	-		ABZR87_RS08710	0.50	-1.5
1,851,547	-		ABZR87_RS08710	0.50	-3.9
1,851,547	-		ABZR87_RS08710	0.50	-0.0
1,851,547	-		ABZR87_RS08710	0.50	-1.1
1,851,549	+		ABZR87_RS08710	0.51	-2.1
1,851,550	-		ABZR87_RS08710	0.51	-1.0
1,851,550	-		ABZR87_RS08710	0.51	-1.0
1,851,550	-		ABZR87_RS08710	0.51	-1.3
1,851,575	+		ABZR87_RS08710	0.55	-0.5
1,851,575	+		ABZR87_RS08710	0.55	-1.9
1,851,575	+		ABZR87_RS08710	0.55	-2.1
1,851,575	+		ABZR87_RS08710	0.55	-1.8
1,851,575	+		ABZR87_RS08710	0.55	-0.7
1,851,576	-		ABZR87_RS08710	0.55	-1.4
1,851,576	-		ABZR87_RS08710	0.55	-2.1
1,851,576	-		ABZR87_RS08710	0.55	-1.5
1,851,576	-		ABZR87_RS08710	0.55	-0.8
1,851,576	-		ABZR87_RS08710	0.55	-1.8
1,851,576	-		ABZR87_RS08710	0.55	-3.1
1,851,587	+		ABZR87_RS08710	0.57	-0.6
1,851,587	+		ABZR87_RS08710	0.57	-3.2
1,851,587	+		ABZR87_RS08710	0.57	-1.7
1,851,587	+		ABZR87_RS08710	0.57	-1.0
1,851,587	+		ABZR87_RS08710	0.57	+0.1
1,851,588	-		ABZR87_RS08710	0.57	-0.9
1,851,588	-		ABZR87_RS08710	0.57	-1.6
1,851,589	+		ABZR87_RS08710	0.57	-3.5
1,851,589	+		ABZR87_RS08710	0.57	-0.5
1,851,589	+		ABZR87_RS08710	0.57	-1.6
1,851,590	-		ABZR87_RS08710	0.57	-1.0
1,851,590	-		ABZR87_RS08710	0.57	-1.1
1,851,590	-		ABZR87_RS08710	0.57	-2.5
1,851,590	-		ABZR87_RS08710	0.57	-0.6
1,851,590	-		ABZR87_RS08710	0.57	-1.5
1,851,666	+		ABZR87_RS08710	0.70	-0.4
1,851,667	-		ABZR87_RS08710	0.70	-0.5
1,851,667	-		ABZR87_RS08710	0.70	-2.3
1,851,701	+		ABZR87_RS08710	0.75	-2.3
1,851,701	+		ABZR87_RS08710	0.75	-1.5
1,851,701	+		ABZR87_RS08710	0.75	-0.9
1,851,702	-		ABZR87_RS08710	0.76	-1.1
1,851,741	+		ABZR87_RS08710	0.82	-1.7
1,851,741	+		ABZR87_RS08710	0.82	+2.9
1,851,741	+		ABZR87_RS08710	0.82	-1.1
1,851,741	+		ABZR87_RS08710	0.82	-2.4
1,851,741	+		ABZR87_RS08710	0.82	-1.7
1,851,741	+		ABZR87_RS08710	0.82	-1.4
1,851,742	-		ABZR87_RS08710	0.82	-0.3
1,851,742	-		ABZR87_RS08710	0.82	-3.1
1,851,742	-		ABZR87_RS08710	0.82	-0.1
1,851,742	-		ABZR87_RS08710	0.82	-2.5
1,851,757	+		ABZR87_RS08710	0.85	-2.2
1,851,757	+		ABZR87_RS08710	0.85	-2.2
1,851,757	+		ABZR87_RS08710	0.85	-0.9
1,851,757	+		ABZR87_RS08710	0.85	-1.3
1,851,757	+		ABZR87_RS08710	0.85	-2.4
1,851,757	+		ABZR87_RS08710	0.85	+0.2
1,851,757	+		ABZR87_RS08710	0.85	-1.7
1,851,757	+		ABZR87_RS08710	0.85	-2.3
1,851,758	-		ABZR87_RS08710	0.85	-0.9
1,851,758	-		ABZR87_RS08710	0.85	-3.2
1,851,848	+				-0.7
1,851,848	+				-0.0
1,851,849	-				-1.0
1,851,849	-				-1.3
1,851,863	-				-1.3
1,851,925	+				-0.2
1,851,925	+				-1.6
1,851,925	+				-1.4
1,851,926	-				-1.2
1,851,926	-				-1.0
1,851,926	-				-0.2
1,851,926	-				-0.2
1,851,926	-				-0.5
1,851,926	-				+0.5
1,851,952	+		ABZR87_RS08715	0.11	-2.9
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