Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS06560

Experiment: Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB
1,396,599	+		ABZR87_RS06555	0.63	-0.3
1,396,599	+		ABZR87_RS06555	0.63	+0.4
1,396,599	+		ABZR87_RS06555	0.63	-0.4
1,396,599	+		ABZR87_RS06555	0.63	-1.8
1,396,599	+		ABZR87_RS06555	0.63	+0.5
1,396,599	+		ABZR87_RS06555	0.63	-0.7
1,396,599	+		ABZR87_RS06555	0.63	-0.5
1,396,600	-		ABZR87_RS06555	0.63	+1.5
1,396,731	+		ABZR87_RS06555	0.72	+0.1
1,396,908	+		ABZR87_RS06555	0.84	-0.8
1,396,965	+		ABZR87_RS06555	0.88	-0.5
1,396,966	-		ABZR87_RS06555	0.88	+1.8
1,397,012	+				-1.2
1,397,012	+				-0.8
1,397,012	+				+0.0
1,397,149	-				-0.3
1,397,149	-				+0.3
1,397,170	+				-0.3
1,397,170	+				+2.0
1,397,170	+				-2.2
1,397,173	-				-1.9
1,397,216	+				+0.1
1,397,245	-				+1.9
1,397,254	+				+0.1
1,397,254	+				+1.0
1,397,255	-				+1.4
1,397,255	-				+0.2
1,397,259	+				-0.5
1,397,260	-				+0.0
1,397,260	-				-1.1
1,397,305	+				-1.4
1,397,343	-				+1.0
1,397,343	-				-1.5
1,397,397	+				+1.5
1,397,398	-				-0.6
1,397,404	+				-0.7
1,397,405	-				-1.3
1,397,405	-				+2.0
1,397,468	+				-1.0
1,397,468	+				+0.6
1,397,468	+				+1.6
1,397,468	+				-1.1
1,397,468	+				+0.6
1,397,468	+				-0.0
1,397,468	+				+0.4
1,397,468	+				+0.2
1,397,468	+				+0.4
1,397,468	+				+0.3
1,397,468	+				+1.9
1,397,468	+				-1.2
1,397,469	-				+0.4
1,397,469	-				+1.3
1,397,469	-				+0.4
1,397,469	-				-1.4
1,397,469	-				-0.3
1,397,469	-				+0.5
1,397,470	+				+2.4
1,397,471	-				-0.2
1,397,471	-				+2.0
1,397,787	-		ABZR87_RS06560	0.25	+1.8
1,397,877	+		ABZR87_RS06560	0.31	+1.9
1,397,877	+		ABZR87_RS06560	0.31	-2.5
1,397,878	-		ABZR87_RS06560	0.31	+1.1
1,397,878	-		ABZR87_RS06560	0.31	+2.8
1,397,878	-		ABZR87_RS06560	0.31	+0.3
1,397,878	-		ABZR87_RS06560	0.31	+0.9
1,397,903	+		ABZR87_RS06560	0.33	-0.1
1,397,903	+		ABZR87_RS06560	0.33	+0.6
1,397,903	+		ABZR87_RS06560	0.33	-0.9
1,398,254	+		ABZR87_RS06560	0.56	-0.4
1,398,254	+		ABZR87_RS06560	0.56	-0.6
1,398,254	+		ABZR87_RS06560	0.56	-0.4
1,398,254	+		ABZR87_RS06560	0.56	-1.4
1,398,255	-		ABZR87_RS06560	0.56	+1.1
1,398,255	-		ABZR87_RS06560	0.56	-1.2
1,398,255	-		ABZR87_RS06560	0.56	+0.1
1,398,767	+		ABZR87_RS06560	0.89	-0.4
1,398,767	+		ABZR87_RS06560	0.89	+1.0
1,398,767	+		ABZR87_RS06560	0.89	-0.8
1,398,768	-		ABZR87_RS06560	0.89	+1.9
1,398,776	+				-1.4
1,398,776	+				-2.0
1,398,776	+				-1.2
1,398,776	+				+0.3
1,398,776	+				-1.0
1,398,776	+				+0.4
1,398,776	+				-1.9
1,398,777	-				-0.7
1,398,777	-				-1.0
1,398,777	-				-1.4
1,398,777	-				-0.5
1,398,777	-				-0.7
1,398,777	-				-0.5
1,398,803	+				+2.5
1,398,803	+				-0.5
1,398,803	+				-0.8
1,398,803	+				-1.1
1,398,854	+				-0.8
1,398,855	-				-2.6
1,398,875	+				-1.6
1,398,875	+				-1.6
1,398,875	+				+0.7
1,398,875	+				-1.3
1,398,875	+				+0.2
1,398,875	+				+2.9
1,398,875	+				-0.4
1,398,875	+				+2.1
1,398,875	+				+1.3
1,398,876	-				-0.1
1,398,876	-				+0.9
1,398,876	-				+0.9
1,398,876	-				-0.6
1,398,876	-				-1.9
1,398,876	-				+3.9
1,398,876	-				-0.5
1,398,876	-				-0.1
1,398,876	-				-0.4
1,398,961	+				-0.2
1,398,961	+				-0.1
1,398,962	-				-0.3
1,398,969	+				+0.7
1,398,969	+				-0.0
1,398,970	-				+0.0
1,398,970	-				+0.4
1,398,975	+				+0.5
1,398,975	+				-0.1
1,398,975	+				-0.5
1,398,975	+				-0.0
1,398,975	+				+0.3
1,398,975	+				-2.5
1,398,975	+				+1.1
1,398,975	+				+0.0
1,398,975	+				-1.5
1,398,975	+				-0.4
1,398,976	-				+1.9
1,398,976	-				-2.2
1,398,976	-				+0.6
1,398,976	-				-0.8
1,398,976	-				-0.5
1,398,976	-				+0.9
1,398,976	-				+0.4
1,399,119	+		ABZR87_RS06565	0.10	+2.9
1,399,140	+		ABZR87_RS06565	0.11	-2.0
1,399,140	+		ABZR87_RS06565	0.11	+0.5
1,399,140	+		ABZR87_RS06565	0.11	+1.1
1,399,140	+		ABZR87_RS06565	0.11	-0.1
1,399,140	+		ABZR87_RS06565	0.11	-2.2
1,399,140	+		ABZR87_RS06565	0.11	-1.3
1,399,141	-		ABZR87_RS06565	0.11	+1.8
1,399,141	-		ABZR87_RS06565	0.11	+0.4
1,399,141	-		ABZR87_RS06565	0.11	+0.2
1,399,141	-		ABZR87_RS06565	0.11	+1.4
1,399,152	+		ABZR87_RS06565	0.12	+0.0
1,399,152	+		ABZR87_RS06565	0.12	-0.8
1,399,152	+		ABZR87_RS06565	0.12	-0.2
1,399,153	-		ABZR87_RS06565	0.12	+0.0
1,399,272	+		ABZR87_RS06565	0.19	-1.1
1,399,273	-		ABZR87_RS06565	0.19	-0.6
1,399,273	-		ABZR87_RS06565	0.19	+0.9
1,399,314	+		ABZR87_RS06565	0.21	+0.1
1,399,314	+		ABZR87_RS06565	0.21	-1.5
1,399,314	+		ABZR87_RS06565	0.21	+2.5
1,399,314	+		ABZR87_RS06565	0.21	-0.1
1,399,314	+		ABZR87_RS06565	0.21	-0.3
1,399,315	-		ABZR87_RS06565	0.21	+1.2
1,399,315	-		ABZR87_RS06565	0.21	+0.9
1,399,315	-		ABZR87_RS06565	0.21	-1.2
1,399,315	-		ABZR87_RS06565	0.21	-0.3
1,399,315	-		ABZR87_RS06565	0.21	+0.6
1,399,315	-		ABZR87_RS06565	0.21	-2.3
1,399,315	-		ABZR87_RS06565	0.21	-1.3
1,399,333	-		ABZR87_RS06565	0.23	+0.5
1,399,333	-		ABZR87_RS06565	0.23	+0.4
1,399,353	+		ABZR87_RS06565	0.24	+1.0
1,399,353	+		ABZR87_RS06565	0.24	+1.6
1,399,353	+		ABZR87_RS06565	0.24	-1.0
1,399,353	+		ABZR87_RS06565	0.24	+0.6
1,399,354	-		ABZR87_RS06565	0.24	-0.2
1,399,354	-		ABZR87_RS06565	0.24	-1.1
1,399,354	-		ABZR87_RS06565	0.24	-0.9
1,399,354	-		ABZR87_RS06565	0.24	+0.3
1,399,354	-		ABZR87_RS06565	0.24	+0.0
1,399,354	-		ABZR87_RS06565	0.24	-3.0
1,399,470	-		ABZR87_RS06565	0.30	+1.3
1,399,572	+		ABZR87_RS06565	0.36	+0.1
1,399,572	+		ABZR87_RS06565	0.36	-0.6
1,399,572	+		ABZR87_RS06565	0.36	+1.3
1,399,572	+		ABZR87_RS06565	0.36	+1.2
1,399,572	+		ABZR87_RS06565	0.36	-0.8
1,399,573	-		ABZR87_RS06565	0.36	-1.9
1,399,573	-		ABZR87_RS06565	0.36	-0.3
1,399,573	-		ABZR87_RS06565	0.36	+1.9
1,399,573	-		ABZR87_RS06565	0.36	-0.2
1,399,863	+		ABZR87_RS06565	0.53	+0.3
1,399,863	+		ABZR87_RS06565	0.53	-0.7
1,399,863	+		ABZR87_RS06565	0.53	-0.2
1,399,863	+		ABZR87_RS06565	0.53	+1.1
1,399,863	+		ABZR87_RS06565	0.53	-0.2
1,399,864	-		ABZR87_RS06565	0.53	-0.1
1,399,864	-		ABZR87_RS06565	0.53	+0.7
1,399,864	-		ABZR87_RS06565	0.53	+0.1
1,399,864	-		ABZR87_RS06565	0.53	-0.5
1,399,864	-		ABZR87_RS06565	0.53	-0.9
1,399,864	-		ABZR87_RS06565	0.53	-0.6
1,399,864	-		ABZR87_RS06565	0.53	-0.3
1,399,864	-		ABZR87_RS06565	0.53	-1.0
1,399,864	-		ABZR87_RS06565	0.53	-0.8
1,399,864	-		ABZR87_RS06565	0.53	+0.1
1,399,864	-		ABZR87_RS06565	0.53	-0.8
1,399,872	+		ABZR87_RS06565	0.54	+0.5
1,399,872	+		ABZR87_RS06565	0.54	-2.7
1,399,872	+		ABZR87_RS06565	0.54	+1.1
1,399,899	+		ABZR87_RS06565	0.55	-0.4
1,399,917	+		ABZR87_RS06565	0.56	-0.7
1,399,917	+		ABZR87_RS06565	0.56	+1.6
1,399,917	+		ABZR87_RS06565	0.56	+0.4
1,399,918	-		ABZR87_RS06565	0.57	-0.5
1,399,918	-		ABZR87_RS06565	0.57	-1.2
1,399,918	-		ABZR87_RS06565	0.57	+0.7