Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS37050

Experiment: R2A with Cisplatin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Cisplatin 0.001 mg/ml
3,768,512	+		RR42_RS37045	0.45	-1.1
3,768,513	-		RR42_RS37045	0.45	-1.1
3,769,065	+				-0.3
3,769,066	-				-0.1
3,769,066	-				+0.4
3,769,066	-				-2.4
3,769,123	-				+0.2
3,769,238	+				-0.2
3,769,238	+				+0.5
3,769,238	+				-0.5
3,769,238	+				+0.3
3,769,288	+				-0.1
3,769,327	+				-0.5
3,769,328	-				+0.4
3,769,328	-				-0.6
3,769,328	-				+0.7
3,769,396	+		RR42_RS37050	0.12	-0.2
3,769,396	+		RR42_RS37050	0.12	-2.7
3,769,396	+		RR42_RS37050	0.12	+0.0
3,769,396	+		RR42_RS37050	0.12	-0.3
3,769,396	+		RR42_RS37050	0.12	+0.6
3,769,396	+		RR42_RS37050	0.12	-0.8
3,769,397	-		RR42_RS37050	0.12	-0.2
3,769,397	-		RR42_RS37050	0.12	+0.4
3,769,397	-		RR42_RS37050	0.12	+0.9
3,769,397	-		RR42_RS37050	0.12	-1.1
3,769,397	-		RR42_RS37050	0.12	-1.3
3,769,397	-		RR42_RS37050	0.12	-0.4
3,769,448	+		RR42_RS37050	0.18	-1.0
3,769,449	-		RR42_RS37050	0.19	-0.9
3,769,449	-		RR42_RS37050	0.19	-0.5
3,769,503	+		RR42_RS37050	0.25	+0.0
3,769,774	+		RR42_RS37050	0.58	-1.1
3,769,774	+		RR42_RS37050	0.58	-2.0
3,769,774	+		RR42_RS37050	0.58	-0.3
3,769,775	-		RR42_RS37050	0.58	+0.9
3,769,775	-		RR42_RS37050	0.58	-2.2
3,769,775	-		RR42_RS37050	0.58	-0.0
3,769,813	+		RR42_RS37050	0.63	+0.8
3,769,813	+		RR42_RS37050	0.63	+0.1
3,769,813	+		RR42_RS37050	0.63	-0.4
3,769,813	+		RR42_RS37050	0.63	-2.6
3,769,813	+		RR42_RS37050	0.63	+0.1
3,769,813	+		RR42_RS37050	0.63	-0.0
3,769,814	-		RR42_RS37050	0.63	-0.6
3,769,814	-		RR42_RS37050	0.63	-0.6
3,769,919	+		RR42_RS37050	0.76	-1.2
3,769,920	-		RR42_RS37050	0.76	-0.7
3,769,949	-		RR42_RS37050	0.79	-0.1
3,770,132	+				-3.2
3,770,132	+				-1.1
3,770,132	+				+0.2
3,770,132	+				-3.9
3,770,132	+				+2.2
3,770,133	-				+0.0
3,770,133	-				-0.4
3,770,133	-				-0.1
3,770,133	-				+0.9
3,770,133	-				-1.4
3,770,144	+				-0.4
3,770,145	-				-1.3
3,770,156	+				+0.2
3,770,157	-				+0.2
3,770,157	-				+0.8
3,770,157	-				-1.9
3,770,157	-				-2.8
3,770,157	-				-0.4
3,770,592	+		RR42_RS37055	0.75	-1.2
3,770,593	-		RR42_RS37055	0.75	-1.2
3,770,593	-		RR42_RS37055	0.75	+0.1
3,770,604	+		RR42_RS37055	0.77	+0.7
3,770,707	+				-1.7
3,770,707	+				+0.3
3,770,723	-				-0.0
3,770,746	+				+0.1
3,770,746	+				-0.1
3,770,746	+				+0.9
3,770,747	-				+0.4
3,770,747	-				-0.4
3,770,768	-				-1.8
3,770,979	-		RR42_RS37060	0.32	-2.9
3,770,979	-		RR42_RS37060	0.32	-0.1
3,770,979	-		RR42_RS37060	0.32	-0.3
3,771,077	+		RR42_RS37060	0.47	+0.5
3,771,077	+		RR42_RS37060	0.47	-1.9
3,771,077	+		RR42_RS37060	0.47	-0.4
3,771,077	+		RR42_RS37060	0.47	+0.1
3,771,078	-		RR42_RS37060	0.47	-0.7
3,771,078	-		RR42_RS37060	0.47	-0.1
3,771,078	-		RR42_RS37060	0.47	-1.0
3,771,078	-		RR42_RS37060	0.47	-1.4
3,771,078	-		RR42_RS37060	0.47	-0.3
3,771,078	-		RR42_RS37060	0.47	+1.3
3,771,078	-		RR42_RS37060	0.47	-0.7
3,771,078	-		RR42_RS37060	0.47	+0.5