Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS36640

Experiment: R2A with Cisplatin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Cisplatin 0.001 mg/ml
3,673,912	+		RR42_RS36635	0.45	+0.1
3,673,913	-		RR42_RS36635	0.45	+1.0
3,673,913	-		RR42_RS36635	0.45	+0.3
3,673,913	-		RR42_RS36635	0.45	-0.4
3,673,913	-		RR42_RS36635	0.45	+1.4
3,673,913	-		RR42_RS36635	0.45	+0.4
3,674,096	-		RR42_RS36635	0.57	-0.5
3,674,269	+		RR42_RS36635	0.68	-0.4
3,674,270	-		RR42_RS36635	0.68	+0.2
3,674,270	-		RR42_RS36635	0.68	-0.7
3,674,270	-		RR42_RS36635	0.68	+1.8
3,674,660	+				+0.0
3,674,660	+				-0.3
3,674,661	-				-0.0
3,674,661	-				+0.3
3,674,661	-				+0.1
3,674,775	+				+0.3
3,674,776	-				+0.1
3,674,813	+				+0.5
3,674,813	+				-2.2
3,674,893	-				-0.5
3,674,905	+				-0.1
3,674,907	+				-1.6
3,674,907	+				+0.5
3,674,908	-				-0.4
3,674,908	-				+1.3
3,674,908	-				-0.9
3,674,908	-				-0.5
3,675,181	-		RR42_RS36640	0.35	+0.4
3,675,264	+		RR42_RS36640	0.43	-1.5
3,675,265	-		RR42_RS36640	0.43	+0.3
3,675,351	+		RR42_RS36640	0.52	-0.5
3,675,352	-		RR42_RS36640	0.52	+1.0
3,675,447	+		RR42_RS36640	0.62	+0.1
3,675,448	-		RR42_RS36640	0.62	+0.1
3,675,553	+		RR42_RS36640	0.73	+1.1
3,675,554	-		RR42_RS36640	0.73	-0.4
3,675,554	-		RR42_RS36640	0.73	+0.4
3,675,554	-		RR42_RS36640	0.73	-0.8
3,675,554	-		RR42_RS36640	0.73	+0.9
3,675,554	-		RR42_RS36640	0.73	-0.4
3,675,555	+		RR42_RS36640	0.73	+2.2
3,675,803	+				+0.8
3,675,803	+				+0.1
3,675,804	-				+0.7
3,675,804	-				-2.5
3,676,226	+		RR42_RS36645	0.10	+0.2
3,676,226	+		RR42_RS36645	0.10	+0.4
3,676,227	-		RR42_RS36645	0.11	+0.5
3,676,227	-		RR42_RS36645	0.11	-1.0
3,676,227	-		RR42_RS36645	0.11	+0.1
3,676,227	-		RR42_RS36645	0.11	-2.0
3,676,227	-		RR42_RS36645	0.11	+0.6
3,676,227	-		RR42_RS36645	0.11	-0.4
3,676,409	+		RR42_RS36645	0.26	+0.9
3,676,409	+		RR42_RS36645	0.26	-3.1
3,676,409	+		RR42_RS36645	0.26	+0.4
3,676,410	-		RR42_RS36645	0.26	+0.6
3,676,410	-		RR42_RS36645	0.26	-1.4
3,676,550	+		RR42_RS36645	0.37	+0.4
3,676,551	-		RR42_RS36645	0.37	-0.3
3,676,551	-		RR42_RS36645	0.37	-0.4
3,676,551	-		RR42_RS36645	0.37	-1.1
3,676,551	-		RR42_RS36645	0.37	-0.0
3,676,805	+		RR42_RS36645	0.58	+0.4
3,676,814	+		RR42_RS36645	0.59	-0.4
3,676,814	+		RR42_RS36645	0.59	+0.7