Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS35575

Experiment: R2A with Cisplatin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Cisplatin 0.001 mg/ml
3,435,571	+				+0.1
3,435,572	-				+0.3
3,435,674	+				+0.0
3,435,711	-				-3.1
3,435,711	-				-0.5
3,435,781	+				+0.5
3,435,781	+				+0.6
3,435,883	+				+0.6
3,435,883	+				+0.3
3,435,883	+				-0.1
3,435,884	-				+0.8
3,435,884	-				+0.5
3,435,887	+				+0.3
3,435,888	-				+0.9
3,435,888	-				+0.8
3,436,031	+				-0.2
3,436,068	+				-0.6
3,436,069	-				+0.3
3,436,069	-				-2.0
3,436,111	+				-1.0
3,436,111	+				-1.2
3,436,111	+				-0.0
3,436,111	+				-1.8
3,436,112	-				-1.1
3,436,112	-				+0.7
3,436,112	-				+0.2
3,436,112	-				-0.1
3,436,112	-				-0.4
3,436,112	-				-2.8
3,436,204	+				+0.2
3,436,240	+				-0.4
3,436,277	-				+0.5
3,436,281	+				+0.5
3,436,281	+				+2.8
3,436,281	+				-0.7
3,436,282	-				-0.3
3,436,301	+				-0.5
3,436,301	+				-1.5
3,436,344	-				-0.1
3,436,358	+				-0.6
3,436,359	-				+0.1
3,436,431	-				-0.3
3,436,586	+				-0.3
3,436,587	-				+0.9
3,436,659	+				-1.0
3,436,669	+				+0.1
3,436,670	-				-1.1
3,436,690	+				+0.6
3,436,691	-				-0.1
3,436,691	-				+1.0
3,436,712	+				-0.6
3,436,779	-		RR42_RS35575	0.12	+0.3
3,436,779	-		RR42_RS35575	0.12	+0.8
3,436,786	+		RR42_RS35575	0.13	-0.2
3,436,786	+		RR42_RS35575	0.13	-0.6
3,436,787	-		RR42_RS35575	0.13	-0.7
3,436,787	-		RR42_RS35575	0.13	-0.3
3,436,787	-		RR42_RS35575	0.13	+1.1
3,436,940	-		RR42_RS35575	0.21	-0.5
3,437,049	+		RR42_RS35575	0.28	-3.1
3,437,050	-		RR42_RS35575	0.28	+0.4
3,437,067	+		RR42_RS35575	0.29	+1.2
3,437,068	-		RR42_RS35575	0.29	+0.2
3,437,099	+		RR42_RS35575	0.31	-0.0
3,437,099	+		RR42_RS35575	0.31	+0.2
3,437,119	+		RR42_RS35575	0.32	-0.7
3,437,168	+		RR42_RS35575	0.35	-0.5
3,437,168	+		RR42_RS35575	0.35	+0.3
3,437,168	+		RR42_RS35575	0.35	-0.5
3,437,169	-		RR42_RS35575	0.35	+0.4
3,437,169	-		RR42_RS35575	0.35	+0.4
3,437,207	+		RR42_RS35575	0.37	-0.1
3,437,208	-		RR42_RS35575	0.37	+0.3
3,437,223	+		RR42_RS35575	0.38	+0.5
3,437,223	+		RR42_RS35575	0.38	+1.0
3,437,223	+		RR42_RS35575	0.38	-1.2
3,437,330	+		RR42_RS35575	0.44	+1.3
3,437,330	+		RR42_RS35575	0.44	-0.3
3,437,386	-		RR42_RS35575	0.47	-0.4
3,437,386	-		RR42_RS35575	0.47	+0.1
3,437,386	-		RR42_RS35575	0.47	-0.1
3,437,400	+		RR42_RS35575	0.48	-1.3
3,437,437	-		RR42_RS35575	0.50	+0.7
3,437,440	+		RR42_RS35575	0.50	+0.9
3,437,441	-		RR42_RS35575	0.50	+0.6
3,437,485	+		RR42_RS35575	0.53	-0.7
3,437,497	-		RR42_RS35575	0.53	-0.1
3,437,549	-		RR42_RS35575	0.56	+0.7
3,437,593	+		RR42_RS35575	0.59	-0.2
3,437,699	-		RR42_RS35575	0.65	+0.7
3,437,703	+		RR42_RS35575	0.65	+0.5
3,437,704	+		RR42_RS35575	0.65	+1.3
3,437,705	-		RR42_RS35575	0.65	+0.3
3,437,705	-		RR42_RS35575	0.65	+0.4
3,437,705	-		RR42_RS35575	0.65	+1.5
3,437,705	-		RR42_RS35575	0.65	-0.0
3,437,737	-		RR42_RS35575	0.67	+1.3
3,437,737	-		RR42_RS35575	0.67	+1.0
3,437,737	-		RR42_RS35575	0.67	+0.6
3,437,737	-		RR42_RS35575	0.67	-0.8
3,437,807	+		RR42_RS35575	0.71	-2.6
3,437,841	+		RR42_RS35575	0.73	+0.3
3,437,841	+		RR42_RS35575	0.73	+1.1
3,437,841	+		RR42_RS35575	0.73	+0.7
3,437,842	-		RR42_RS35575	0.73	-0.8
3,437,858	+		RR42_RS35575	0.74	+0.2
3,437,858	+		RR42_RS35575	0.74	+0.1
3,437,859	-		RR42_RS35575	0.74	+1.2
3,437,893	-		RR42_RS35575	0.76	-0.8
3,437,937	+		RR42_RS35575	0.79	-0.1
3,437,937	+		RR42_RS35575	0.79	+0.1
3,437,938	-		RR42_RS35575	0.79	+0.8
3,438,182	-				-0.4
3,438,218	+				-0.0
3,438,271	+				-0.8
3,438,271	+				+0.6
3,438,271	+				+0.3
3,438,271	+				+0.4
3,438,272	-				-1.0
3,438,272	-				-0.2
3,438,306	+				-1.2
3,438,307	-				-0.1
3,438,327	-				-0.2
3,438,327	-				+0.6
3,438,366	+				+0.8
3,438,366	+				+0.1
3,438,366	+				-0.5
3,438,379	-				-1.0
3,438,379	-				+0.7
3,438,448	+				-0.1
3,438,449	-				-0.2
3,438,449	-				+0.4
3,438,499	+				-0.0
3,438,500	-				-0.2
3,438,500	-				+0.5
3,438,579	+				-0.5
3,438,580	-				-1.2
3,438,601	+				+0.1
3,438,602	-				-0.1
3,438,612	+				+0.2
3,438,613	-				-0.1
3,438,618	+				-0.9
3,438,619	-				+0.4
3,438,619	-				-1.4
3,438,861	+		RR42_RS35580	0.12	-0.3
3,438,862	-		RR42_RS35580	0.12	+0.2
3,438,889	+		RR42_RS35580	0.14	+0.9
3,438,890	-		RR42_RS35580	0.14	+0.1
3,438,913	+		RR42_RS35580	0.16	-0.2
3,438,914	-		RR42_RS35580	0.16	-1.2
3,438,973	+		RR42_RS35580	0.19	-1.3
3,439,117	+		RR42_RS35580	0.29	+0.1
3,439,117	+		RR42_RS35580	0.29	+0.6
3,439,118	-		RR42_RS35580	0.29	+0.1
3,439,118	-		RR42_RS35580	0.29	-0.6
3,439,118	-		RR42_RS35580	0.29	+0.4
3,439,118	-		RR42_RS35580	0.29	-0.4