Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS32400

Experiment: R2A with Cisplatin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Cisplatin 0.001 mg/ml
2,663,149	-		RR42_RS32395	0.22	-0.2
2,663,205	+		RR42_RS32395	0.29	-0.3
2,663,335	+		RR42_RS32395	0.47	+2.4
2,663,371	+		RR42_RS32395	0.52	-0.1
2,663,371	+		RR42_RS32395	0.52	-0.3
2,663,372	-		RR42_RS32395	0.52	+0.3
2,663,372	-		RR42_RS32395	0.52	+0.3
2,663,452	+		RR42_RS32395	0.63	+0.0
2,663,452	+		RR42_RS32395	0.63	-0.2
2,663,652	+				+0.4
2,663,711	+				+0.1
2,663,711	+				-1.2
2,663,712	-				-1.0
2,663,712	-				-0.5
2,663,712	-				-0.2
2,664,249	-		RR42_RS32400	0.36	-0.1
2,664,249	-		RR42_RS32400	0.36	-0.1
2,664,286	+		RR42_RS32400	0.44	-0.2
2,664,298	+		RR42_RS32400	0.46	+0.7
2,664,298	+		RR42_RS32400	0.46	-1.5
2,664,304	+		RR42_RS32400	0.47	-0.2
2,664,319	+		RR42_RS32400	0.51	-1.1
2,664,319	+		RR42_RS32400	0.51	-0.1
2,664,341	+		RR42_RS32400	0.55	+0.1
2,664,341	+		RR42_RS32400	0.55	-1.1
2,664,342	-		RR42_RS32400	0.55	+0.1
2,664,342	-		RR42_RS32400	0.55	+0.1
2,664,342	-		RR42_RS32400	0.55	-0.7
2,664,404	-		RR42_RS32400	0.69	-0.3
2,664,451	+		RR42_RS32400	0.79	+0.3
2,664,722	+				+0.5
2,664,756	+				-0.7
2,664,756	+				-0.6
2,664,756	+				+0.4
2,664,757	-				+0.2
2,664,757	-				-0.1
2,664,757	-				+0.0
2,664,873	+		RR42_RS32405	0.15	+0.8
2,664,942	+		RR42_RS32405	0.24	-0.3
2,664,942	+		RR42_RS32405	0.24	+0.4
2,664,942	+		RR42_RS32405	0.24	+1.7
2,664,943	-		RR42_RS32405	0.24	+0.1
2,664,943	-		RR42_RS32405	0.24	-0.3
2,664,975	+		RR42_RS32405	0.28	-0.5
2,664,976	-		RR42_RS32405	0.28	-0.6
2,664,976	-		RR42_RS32405	0.28	-0.1
2,665,164	+		RR42_RS32405	0.52	-0.3
2,665,164	+		RR42_RS32405	0.52	+1.1
2,665,164	+		RR42_RS32405	0.52	+0.1
2,665,165	-		RR42_RS32405	0.52	-0.6
2,665,165	-		RR42_RS32405	0.52	+0.4
2,665,165	-		RR42_RS32405	0.52	+1.0
2,665,165	-		RR42_RS32405	0.52	+0.6