Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS29920

Experiment: R2A with Cisplatin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Cisplatin 0.001 mg/ml
2,078,028	+				-0.5
2,078,028	+				+0.3
2,078,028	+				-0.1
2,078,042	-				+0.3
2,078,057	+				+1.7
2,078,057	+				+0.2
2,078,057	+				-0.2
2,078,057	+				-2.6
2,078,058	-				+0.5
2,078,058	-				-0.5
2,078,058	-				+0.5
2,078,058	-				-0.1
2,078,074	+				+0.4
2,078,074	+				-0.3
2,078,075	-				+0.7
2,078,112	+				+0.4
2,078,112	+				-0.4
2,078,112	+				-0.6
2,078,112	+				+0.4
2,078,112	+				-0.2
2,078,112	+				+1.0
2,078,113	-				-0.2
2,078,113	-				+0.7
2,078,113	-				+0.7
2,078,116	+				+0.5
2,078,116	+				+0.0
2,078,117	-				+0.3
2,078,117	-				+0.7
2,078,149	+				+2.9
2,078,149	+				-3.8
2,078,149	+				-0.1
2,078,149	+				+0.5
2,078,149	+				+1.1
2,078,149	+				+0.1
2,078,150	-				-0.3
2,078,150	-				-0.1
2,078,150	-				-0.1
2,078,163	-				+0.4
2,078,165	+				+1.2
2,078,166	-				-0.7
2,078,166	-				+0.3
2,078,221	+				-0.6
2,078,221	+				+0.4
2,078,229	-				+0.9
2,078,260	-				-0.1
2,078,260	-				-2.0
2,078,331	+				+0.3
2,078,331	+				-0.4
2,078,332	-				+1.5
2,078,332	-				+0.7
2,078,418	+				-1.2
2,078,527	-		RR42_RS29915	0.25	+0.0
2,078,558	-		RR42_RS29915	0.32	-1.2
2,078,558	-		RR42_RS29915	0.32	+0.1
2,078,558	-		RR42_RS29915	0.32	-0.3
2,078,664	+		RR42_RS29915	0.56	-0.2
2,078,748	+		RR42_RS29915	0.75	+0.2
2,078,749	-		RR42_RS29915	0.75	+0.1
2,078,757	+		RR42_RS29915	0.77	-0.5
2,078,758	-		RR42_RS29915	0.77	+0.1
2,078,801	+		RR42_RS29915	0.86	+0.2
2,078,801	+		RR42_RS29915	0.86	-0.3
2,078,802	-		RR42_RS29915	0.87	+0.3
2,078,802	-		RR42_RS29915	0.87	+0.2
2,078,802	-		RR42_RS29915	0.87	+0.2
2,078,802	-		RR42_RS29915	0.87	+0.7
2,078,802	-		RR42_RS29915	0.87	+1.4
2,078,823	-				+1.3
2,078,863	+				+0.7
2,078,863	+				+0.2
2,078,864	-				-1.8
2,078,873	-				-0.3
2,078,959	-				-0.3
2,079,034	+				-0.7
2,079,034	+				+0.6
2,079,035	-				+0.2
2,079,040	+				-2.3
2,079,040	+				-0.1
2,079,041	-				+0.5
2,079,041	-				+1.1
2,079,041	-				+0.2
2,079,133	-		RR42_RS29920	0.33	-1.0
2,079,204	+		RR42_RS29920	0.52	-0.7
2,079,212	+		RR42_RS29920	0.55	-0.7
2,079,212	+		RR42_RS29920	0.55	-0.8
2,079,213	-		RR42_RS29920	0.55	-0.6
2,079,213	-		RR42_RS29920	0.55	+0.3
2,079,213	-		RR42_RS29920	0.55	-0.6
2,079,344	+				+0.2
2,079,344	+				-0.8
2,079,345	-				-1.2
2,079,354	+				-0.1
2,079,354	+				+0.5
2,079,354	+				-0.1
2,079,354	+				-0.7
2,079,355	-				+0.0
2,079,355	-				-1.6
2,079,355	-				+1.5
2,079,382	+				+0.9
2,079,382	+				-1.5
2,079,383	-				-0.6
2,079,383	-				-1.4
2,079,383	-				-0.1
2,079,414	+				+0.1
2,079,435	+				+0.4
2,079,436	-				-0.4
2,079,478	-				+0.2
2,079,478	-				-0.2
2,079,533	+				-1.3
2,079,633	+				-0.1
2,079,641	+				+0.4
2,079,641	+				+0.1
2,079,641	+				-0.6
2,079,642	-				-0.4
2,079,705	+				-0.9
2,079,706	-				-0.2
2,079,706	-				-0.8
2,079,745	+		RR42_RS29925	0.11	-0.8
2,079,783	+		RR42_RS29925	0.14	+1.3
2,079,783	+		RR42_RS29925	0.14	+0.2
2,079,784	-		RR42_RS29925	0.14	-0.4
2,079,830	+		RR42_RS29925	0.18	-0.4
2,079,831	-		RR42_RS29925	0.18	+1.1
2,079,846	+		RR42_RS29925	0.19	-0.4
2,079,850	-		RR42_RS29925	0.20	-0.3
2,079,850	-		RR42_RS29925	0.20	+0.2
2,079,864	+		RR42_RS29925	0.21	+0.1
2,079,864	+		RR42_RS29925	0.21	-0.4
2,079,864	+		RR42_RS29925	0.21	-2.5
2,079,864	+		RR42_RS29925	0.21	-0.2
2,079,865	-		RR42_RS29925	0.21	-0.0
2,079,865	-		RR42_RS29925	0.21	+0.2
2,079,865	-		RR42_RS29925	0.21	-0.1
2,079,865	-		RR42_RS29925	0.21	+0.2
2,080,026	+		RR42_RS29925	0.35	+0.7
2,080,026	+		RR42_RS29925	0.35	+0.7
2,080,026	+		RR42_RS29925	0.35	+0.1
2,080,026	+		RR42_RS29925	0.35	+0.6
2,080,027	-		RR42_RS29925	0.35	-0.3
2,080,051	-		RR42_RS29925	0.37	-0.4
2,080,076	-		RR42_RS29925	0.39	+0.3
2,080,175	-		RR42_RS29925	0.47	-0.2
2,080,175	-		RR42_RS29925	0.47	+0.3
2,080,175	-		RR42_RS29925	0.47	+1.0
2,080,236	+		RR42_RS29925	0.52	+0.8
2,080,242	+		RR42_RS29925	0.53	+1.6
2,080,243	-		RR42_RS29925	0.53	-0.8
2,080,243	-		RR42_RS29925	0.53	+0.9
2,080,250	+		RR42_RS29925	0.54	+0.9
2,080,250	+		RR42_RS29925	0.54	-0.1
2,080,250	+		RR42_RS29925	0.54	+0.3
2,080,250	+		RR42_RS29925	0.54	-0.7
2,080,250	+		RR42_RS29925	0.54	+0.2
2,080,250	+		RR42_RS29925	0.54	+0.6
2,080,250	+		RR42_RS29925	0.54	-0.1
2,080,251	-		RR42_RS29925	0.54	-0.2
2,080,263	+		RR42_RS29925	0.55	-1.0
2,080,332	+		RR42_RS29925	0.60	+0.7
2,080,333	-		RR42_RS29925	0.61	+0.5
2,080,358	+		RR42_RS29925	0.63	-0.5
2,080,359	-		RR42_RS29925	0.63	+0.5