Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS26870

Experiment: R2A with Cisplatin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Cisplatin 0.001 mg/ml
1,381,458	+		RR42_RS26865	0.19	+0.9
1,381,458	+		RR42_RS26865	0.19	-2.8
1,381,459	-		RR42_RS26865	0.19	-0.4
1,381,459	-		RR42_RS26865	0.19	-0.4
1,381,459	-		RR42_RS26865	0.19	-1.3
1,381,470	+		RR42_RS26865	0.21	-1.8
1,381,531	-		RR42_RS26865	0.31	+0.3
1,381,539	+		RR42_RS26865	0.32	-0.0
1,381,540	-		RR42_RS26865	0.32	+0.1
1,381,540	-		RR42_RS26865	0.32	-1.0
1,381,540	-		RR42_RS26865	0.32	+0.8
1,381,540	-		RR42_RS26865	0.32	-0.2
1,381,625	+		RR42_RS26865	0.46	-1.3
1,381,626	-		RR42_RS26865	0.46	+0.9
1,381,626	-		RR42_RS26865	0.46	+0.3
1,381,725	+		RR42_RS26865	0.63	+0.9
1,381,725	+		RR42_RS26865	0.63	+1.1
1,381,726	-		RR42_RS26865	0.63	-0.0
1,381,726	-		RR42_RS26865	0.63	-0.3
1,381,728	+		RR42_RS26865	0.63	-0.7
1,381,728	+		RR42_RS26865	0.63	+0.8
1,381,728	+		RR42_RS26865	0.63	-0.7
1,381,728	+		RR42_RS26865	0.63	+0.8
1,381,728	+		RR42_RS26865	0.63	+0.1
1,381,729	-		RR42_RS26865	0.64	+0.0
1,381,729	-		RR42_RS26865	0.64	+2.2
1,381,729	-		RR42_RS26865	0.64	+0.7
1,381,891	-				+0.5
1,381,935	-				+0.2
1,381,978	+				-1.6
1,381,979	-				+0.4
1,382,067	+				+0.7
1,382,067	+				+0.7
1,382,084	-				-1.0
1,382,163	+				+0.1
1,382,420	+				+0.7
1,382,441	+				+1.0
1,382,441	+				-0.2
1,382,441	+				-0.4
1,382,442	-				+0.3
1,382,442	-				-0.3
1,382,442	-				-0.1
1,382,442	-				-0.6
1,382,628	-		RR42_RS26870	0.30	+0.1
1,382,747	+		RR42_RS26870	0.47	-0.9
1,382,748	-		RR42_RS26870	0.47	-0.9
1,382,776	+		RR42_RS26870	0.52	-0.6
1,382,776	+		RR42_RS26870	0.52	-0.1
1,382,777	-		RR42_RS26870	0.52	+0.8
1,382,777	-		RR42_RS26870	0.52	-0.2
1,382,777	-		RR42_RS26870	0.52	-0.8
1,382,777	-		RR42_RS26870	0.52	-0.5
1,383,026	+		RR42_RS26870	0.87	-1.0
1,383,026	+		RR42_RS26870	0.87	-0.3
1,383,027	-		RR42_RS26870	0.87	+0.9
1,383,147	+				+0.3
1,383,147	+				+0.1
1,383,148	-				-0.1
1,383,148	-				+0.5
1,383,204	+				-0.1
1,383,366	-				-0.1
1,383,583	-		RR42_RS26875	0.21	-0.5