Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS25795

Experiment: R2A with Cisplatin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Cisplatin 0.001 mg/ml
1,126,427	-		RR42_RS25790	0.56	+0.3
1,126,427	-		RR42_RS25790	0.56	+0.4
1,126,427	-		RR42_RS25790	0.56	+1.2
1,126,471	+		RR42_RS25790	0.58	+0.0
1,126,472	-		RR42_RS25790	0.58	+0.6
1,126,472	-		RR42_RS25790	0.58	+0.7
1,126,557	-		RR42_RS25790	0.62	-0.6
1,127,010	+		RR42_RS25790	0.82	-0.2
1,127,010	+		RR42_RS25790	0.82	+0.2
1,127,011	-		RR42_RS25790	0.82	+0.4
1,127,037	+		RR42_RS25790	0.83	+0.1
1,127,074	-		RR42_RS25790	0.85	+0.6
1,127,160	+		RR42_RS25790	0.88	-0.2
1,127,160	+		RR42_RS25790	0.88	+1.0
1,127,160	+		RR42_RS25790	0.88	-0.6
1,127,160	+		RR42_RS25790	0.88	+0.3
1,127,161	-		RR42_RS25790	0.88	+0.3
1,127,287	-				-0.3
1,127,298	-				+0.4
1,127,443	+		RR42_RS25795	0.10	+1.6
1,127,444	-		RR42_RS25795	0.11	+0.1
1,127,444	-		RR42_RS25795	0.11	+0.3
1,127,496	-		RR42_RS25795	0.22	-0.3
1,127,555	-		RR42_RS25795	0.35	+0.0
1,127,568	+		RR42_RS25795	0.38	+0.5
1,127,682	+		RR42_RS25795	0.64	-0.2
1,127,704	-		RR42_RS25795	0.69	+0.3
1,127,704	-		RR42_RS25795	0.69	+1.3
1,127,704	-		RR42_RS25795	0.69	-1.1
1,127,723	+		RR42_RS25795	0.73	+1.3
1,127,724	-		RR42_RS25795	0.73	+0.1
1,127,724	-		RR42_RS25795	0.73	+0.1
1,127,729	+		RR42_RS25795	0.74	+1.1
1,127,730	-		RR42_RS25795	0.74	-0.4
1,127,896	-				-0.8
1,127,925	+				-3.1
1,127,985	-				+0.3
1,128,000	-		RR42_RS25800	0.11	+0.5
1,128,023	+		RR42_RS25800	0.13	+0.2
1,128,023	+		RR42_RS25800	0.13	+0.7
1,128,023	+		RR42_RS25800	0.13	-0.1
1,128,026	+		RR42_RS25800	0.13	-0.2
1,128,027	-		RR42_RS25800	0.13	+1.1
1,128,027	-		RR42_RS25800	0.13	-2.6
1,128,027	-		RR42_RS25800	0.13	+0.9
1,128,083	+		RR42_RS25800	0.18	+0.5
1,128,090	+		RR42_RS25800	0.19	-2.6
1,128,172	+		RR42_RS25800	0.27	+0.3
1,128,172	+		RR42_RS25800	0.27	-1.3
1,128,173	-		RR42_RS25800	0.27	+0.3
1,128,188	+		RR42_RS25800	0.28	-1.1
1,128,189	-		RR42_RS25800	0.28	-0.2
1,128,330	+		RR42_RS25800	0.41	+0.7
1,128,392	+		RR42_RS25800	0.47	-2.0
1,128,392	+		RR42_RS25800	0.47	+1.0
1,128,393	-		RR42_RS25800	0.47	+0.2
1,128,393	-		RR42_RS25800	0.47	-0.2
1,128,393	-		RR42_RS25800	0.47	+0.9
1,128,393	-		RR42_RS25800	0.47	+0.6
1,128,409	-		RR42_RS25800	0.49	+0.5
1,128,409	-		RR42_RS25800	0.49	-1.7
1,128,409	-		RR42_RS25800	0.49	-0.4
1,128,411	-		RR42_RS25800	0.49	-1.7
1,128,411	-		RR42_RS25800	0.49	-0.9
1,128,411	-		RR42_RS25800	0.49	-0.5
1,128,455	+		RR42_RS25800	0.53	-1.3
1,128,498	-		RR42_RS25800	0.57	-0.1
1,128,501	+		RR42_RS25800	0.57	+0.1
1,128,501	+		RR42_RS25800	0.57	-1.5
1,128,501	+		RR42_RS25800	0.57	-0.3
1,128,502	-		RR42_RS25800	0.57	-0.4
1,128,502	-		RR42_RS25800	0.57	-0.6
1,128,502	-		RR42_RS25800	0.57	-0.0
1,128,557	+		RR42_RS25800	0.62	+0.9
1,128,557	+		RR42_RS25800	0.62	-1.7
1,128,557	+		RR42_RS25800	0.62	+0.2
1,128,563	+		RR42_RS25800	0.63	-1.8
1,128,564	-		RR42_RS25800	0.63	+0.2
1,128,688	+		RR42_RS25800	0.74	-0.4
1,128,689	-		RR42_RS25800	0.75	-0.5