Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS20960
Experiment: R2A with Cisplatin 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | R2A with Cisplatin 0.001 mg/ml |
---|---|---|---|---|---|
remove | |||||
29,195 | + | +1.3 | |||
29,243 | + | -0.6 | |||
29,287 | + | +0.2 | |||
29,288 | - | +0.5 | |||
29,414 | + | -0.8 | |||
29,544 | - | +1.8 | |||
29,874 | - | +2.6 | |||
29,898 | - | -0.6 | |||
29,957 | + | -0.2 | |||
30,126 | + | -0.3 | |||
30,307 | + | RR42_RS20960 | 0.28 | +0.0 | |
30,307 | + | RR42_RS20960 | 0.28 | -0.3 | |
30,307 | + | RR42_RS20960 | 0.28 | +0.4 | |
30,307 | + | RR42_RS20960 | 0.28 | -0.6 | |
30,308 | - | RR42_RS20960 | 0.28 | -0.6 | |
30,308 | - | RR42_RS20960 | 0.28 | +0.3 | |
30,308 | - | RR42_RS20960 | 0.28 | +0.1 | |
30,354 | - | RR42_RS20960 | 0.34 | +0.9 | |
30,451 | + | RR42_RS20960 | 0.46 | +0.7 | |
30,452 | - | RR42_RS20960 | 0.46 | -0.6 | |
30,701 | - | RR42_RS20960 | 0.77 | +0.9 | |
30,751 | - | RR42_RS20960 | 0.83 | -1.3 | |
30,865 | + | -0.7 | |||
31,180 | - | RR42_RS20965 | 0.21 | +1.4 | |
31,438 | - | RR42_RS20965 | 0.42 | +0.1 | |
31,881 | - | RR42_RS20965 | 0.80 | +0.2 | |
31,881 | - | RR42_RS20965 | 0.80 | -0.1 |
Or see this region's nucleotide sequence