Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS19835

Experiment: R2A with Cisplatin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Cisplatin 0.001 mg/ml
4,280,361	+		RR42_RS19830	0.81	-0.1
4,280,362	-		RR42_RS19830	0.81	+1.1
4,280,522	+				+0.8
4,280,522	+				+0.4
4,280,522	+				+0.2
4,280,522	+				-0.4
4,280,523	-				-0.3
4,280,523	-				+0.2
4,280,558	+				+0.7
4,280,558	+				+0.3
4,280,559	-				-0.5
4,280,648	-				+0.4
4,280,668	+				+0.3
4,280,669	-				-0.3
4,280,693	-				+0.1
4,280,759	-				+0.1
4,280,759	-				+0.0
4,280,791	+				+0.2
4,280,791	+				+0.2
4,280,791	+				+0.4
4,280,791	+				-0.0
4,280,792	-				-0.3
4,280,792	-				-1.2
4,280,792	-				+0.9
4,280,792	-				+0.4
4,280,792	-				-0.0
4,280,792	-				-0.5
4,281,023	+				-0.1
4,281,038	+		RR42_RS19835	0.11	-1.6
4,281,173	+		RR42_RS19835	0.21	+0.1
4,281,467	+		RR42_RS19835	0.43	-0.2
4,281,467	+		RR42_RS19835	0.43	-0.0
4,281,468	-		RR42_RS19835	0.43	-0.8
4,281,554	+		RR42_RS19835	0.50	-0.1
4,281,554	+		RR42_RS19835	0.50	+0.2
4,281,554	+		RR42_RS19835	0.50	+1.5
4,281,554	+		RR42_RS19835	0.50	+0.3
4,281,554	+		RR42_RS19835	0.50	-0.0
4,281,554	+		RR42_RS19835	0.50	-0.3
4,281,555	-		RR42_RS19835	0.50	+2.8
4,281,689	+		RR42_RS19835	0.60	-0.4
4,281,701	+		RR42_RS19835	0.61	+0.3
4,281,702	-		RR42_RS19835	0.61	-0.3
4,281,702	-		RR42_RS19835	0.61	+0.4
4,281,716	+		RR42_RS19835	0.62	+1.4
4,281,884	+		RR42_RS19835	0.75	+0.7
4,281,884	+		RR42_RS19835	0.75	+0.1
4,282,046	+		RR42_RS19835	0.87	+1.3
4,282,047	-		RR42_RS19835	0.88	+0.7
4,282,047	-		RR42_RS19835	0.88	+1.9
4,282,047	-		RR42_RS19835	0.88	+0.1
4,282,047	-		RR42_RS19835	0.88	-2.2
4,282,139	+				+0.2
4,282,139	+				+0.8
4,282,260	-				-0.1
4,282,260	-				+1.4
4,282,443	+		RR42_RS19840	0.15	+0.5
4,282,794	-		RR42_RS19840	0.44	+0.8
4,283,016	-		RR42_RS19840	0.62	-0.4
4,283,016	-		RR42_RS19840	0.62	-1.5