Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS19125
Experiment: R2A with Cisplatin 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | R2A with Cisplatin 0.001 mg/ml |
---|---|---|---|---|---|
remove | |||||
4,143,381 | - | RR42_RS19115 | 0.32 | -0.6 | |
4,143,419 | + | RR42_RS19115 | 0.43 | -0.2 | |
4,143,420 | - | RR42_RS19115 | 0.43 | -0.3 | |
4,143,489 | - | RR42_RS19115 | 0.63 | -1.3 | |
4,143,489 | - | RR42_RS19115 | 0.63 | -1.4 | |
4,143,697 | + | -0.2 | |||
4,143,697 | + | +0.5 | |||
4,143,698 | - | -0.1 | |||
4,143,698 | - | -2.9 | |||
4,143,698 | - | -1.0 | |||
4,143,713 | + | -0.5 | |||
4,143,714 | - | -0.1 | |||
4,143,714 | - | -0.4 | |||
4,143,714 | - | +0.3 | |||
4,144,334 | - | -0.3 | |||
4,144,334 | - | -0.5 | |||
4,144,334 | - | -2.4 | |||
4,144,334 | - | -1.7 | |||
4,144,334 | - | -2.8 | |||
4,145,399 | - | -0.5 | |||
4,145,399 | - | -0.6 |
Or see this region's nucleotide sequence