Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS17110

Experiment: R2A with Cisplatin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Cisplatin 0.001 mg/ml
3,707,244	+		RR42_RS17105	0.57	-0.6
3,707,448	+		RR42_RS17105	0.66	-4.2
3,707,488	-		RR42_RS17105	0.68	-2.8
3,707,488	-		RR42_RS17105	0.68	-1.6
3,707,488	-		RR42_RS17105	0.68	-3.7
3,707,856	+		RR42_RS17105	0.84	-3.0
3,707,856	+		RR42_RS17105	0.84	-2.6
3,707,856	+		RR42_RS17105	0.84	-3.6
3,707,856	+		RR42_RS17105	0.84	-1.5
3,707,856	+		RR42_RS17105	0.84	-3.6
3,707,857	-		RR42_RS17105	0.84	-3.2
3,707,857	-		RR42_RS17105	0.84	-1.6
3,707,857	-		RR42_RS17105	0.84	-3.7
3,707,857	-		RR42_RS17105	0.84	-2.1
3,707,857	-		RR42_RS17105	0.84	-5.0
3,707,859	+		RR42_RS17105	0.84	-3.2
3,707,859	+		RR42_RS17105	0.84	-2.5
3,707,859	+		RR42_RS17105	0.84	-1.0
3,707,859	+		RR42_RS17105	0.84	-3.2
3,707,860	-		RR42_RS17105	0.84	-3.4
3,707,860	-		RR42_RS17105	0.84	-2.8
3,707,860	-		RR42_RS17105	0.84	-1.6
3,708,076	+				-2.9
3,708,077	-				-4.9
3,708,134	+				-2.5
3,708,152	+				-2.6
3,708,153	-				-2.5
3,708,154	+				-3.1
3,708,154	+				-3.0
3,708,155	-				-2.0
3,708,315	+		RR42_RS17110	0.28	-2.7
3,708,316	-		RR42_RS17110	0.28	-0.4
3,708,317	+		RR42_RS17110	0.29	-3.2
3,708,317	+		RR42_RS17110	0.29	-3.3
3,708,317	+		RR42_RS17110	0.29	-2.1
3,708,317	+		RR42_RS17110	0.29	-2.4
3,708,317	+		RR42_RS17110	0.29	-2.3
3,708,317	+		RR42_RS17110	0.29	-4.7
3,708,317	+		RR42_RS17110	0.29	-1.9
3,708,317	+		RR42_RS17110	0.29	-4.1
3,708,317	+		RR42_RS17110	0.29	-0.9
3,708,317	+		RR42_RS17110	0.29	-2.3
3,708,317	+		RR42_RS17110	0.29	-4.0
3,708,317	+		RR42_RS17110	0.29	-3.1
3,708,317	+		RR42_RS17110	0.29	-2.8
3,708,318	-		RR42_RS17110	0.29	-2.7
3,708,318	-		RR42_RS17110	0.29	+0.5
3,708,318	-		RR42_RS17110	0.29	-1.5
3,708,318	-		RR42_RS17110	0.29	+0.6
3,708,318	-		RR42_RS17110	0.29	-0.5
3,708,318	-		RR42_RS17110	0.29	+1.1
3,708,318	-		RR42_RS17110	0.29	-0.3
3,708,318	-		RR42_RS17110	0.29	-0.3
3,708,318	-		RR42_RS17110	0.29	-0.7
3,708,318	-		RR42_RS17110	0.29	+0.7
3,708,336	+		RR42_RS17110	0.35	-2.9
3,708,337	-		RR42_RS17110	0.35	-1.2
3,708,395	+		RR42_RS17110	0.53	-3.0
3,708,395	+		RR42_RS17110	0.53	-3.0
3,708,395	+		RR42_RS17110	0.53	-2.1
3,708,396	-		RR42_RS17110	0.53	+0.5
3,708,396	-		RR42_RS17110	0.53	-1.7
3,708,461	+		RR42_RS17110	0.73	-3.1
3,708,461	+		RR42_RS17110	0.73	-3.9
3,708,461	+		RR42_RS17110	0.73	-2.3
3,708,461	+		RR42_RS17110	0.73	-2.1
3,708,461	+		RR42_RS17110	0.73	-2.4
3,708,462	-		RR42_RS17110	0.73	-3.7
3,708,462	-		RR42_RS17110	0.73	+0.4
3,708,462	-		RR42_RS17110	0.73	+0.2
3,708,462	-		RR42_RS17110	0.73	-0.5
3,708,462	-		RR42_RS17110	0.73	+0.3
3,708,462	-		RR42_RS17110	0.73	-0.2
3,708,502	+		RR42_RS17110	0.85	-2.9
3,708,502	+		RR42_RS17110	0.85	-3.4
3,708,502	+		RR42_RS17110	0.85	-3.4
3,708,503	-		RR42_RS17110	0.86	-0.2
3,708,503	-		RR42_RS17110	0.86	-0.6
3,708,503	-		RR42_RS17110	0.86	-0.6
3,708,543	+				-3.3
3,708,543	+				-3.3
3,708,543	+				-2.0
3,708,544	-				-1.1
3,708,555	+				-3.3
3,708,555	+				-3.1
3,708,555	+				-1.7
3,708,568	-				+0.7
3,708,568	-				-0.6
3,708,724	+				+0.4
3,708,724	+				-0.3
3,708,731	+				-1.1
3,708,731	+				-1.0
3,708,731	+				+0.7
3,708,731	+				-0.4
3,708,732	-				+0.1
3,708,732	-				-0.3
3,708,732	-				+0.4
3,708,732	-				-0.1
3,708,732	-				-0.3
3,708,732	-				+0.1
3,708,732	-				+0.7
3,708,732	-				-0.5
3,708,834	+				-0.4
3,708,995	+				+0.8
3,708,996	-				-1.3
3,709,035	+				+0.5
3,709,035	+				+1.3
3,709,035	+				+0.2
3,709,036	-				+0.6
3,709,036	-				+0.1
3,709,063	-				-1.3
3,709,252	-				+0.3
3,709,371	+				+0.1
3,709,372	-				-0.9
3,709,390	+				-0.1
3,709,390	+				-0.3
3,709,390	+				-0.3
3,709,390	+				-0.0
3,709,390	+				-0.6
3,709,390	+				+0.7
3,709,391	-				-0.1
3,709,391	-				-1.7
3,709,391	-				+0.1
3,709,391	-				+0.4
3,709,391	-				+0.4
3,709,391	-				+0.0
3,709,391	-				-0.4
3,709,391	-				+0.1
3,709,394	+				+1.0
3,709,394	+				-0.3
3,709,394	+				+0.7
3,709,395	-				-0.0
3,709,395	-				+0.6
3,709,461	+				-0.4