Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS15540

Experiment: R2A with Cisplatin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Cisplatin 0.001 mg/ml
3,355,970	-		RR42_RS15530	0.76	+0.6
3,355,970	-		RR42_RS15530	0.76	+1.7
3,356,042	+		RR42_RS15530	0.83	+0.1
3,356,043	-		RR42_RS15530	0.84	+0.4
3,356,043	-		RR42_RS15530	0.84	-0.1
3,356,165	+				+0.1
3,356,188	+				-1.8
3,356,188	+				+0.4
3,356,188	+				-0.8
3,356,188	+				+0.4
3,356,188	+				-2.7
3,356,188	+				-0.6
3,356,188	+				+0.0
3,356,188	+				+0.6
3,356,189	-				+0.4
3,356,189	-				+0.7
3,356,189	-				-0.2
3,356,342	+		RR42_RS15535	0.13	-0.2
3,356,342	+		RR42_RS15535	0.13	-1.5
3,356,443	-		RR42_RS15535	0.32	-0.4
3,356,446	+		RR42_RS15535	0.32	-0.1
3,356,661	-		RR42_RS15535	0.71	-2.4
3,356,715	-		RR42_RS15535	0.81	-1.5
3,356,715	-		RR42_RS15535	0.81	-0.2
3,356,796	+				+0.2
3,356,796	+				-0.4
3,356,797	-				+0.4
3,356,797	-				-1.2
3,357,057	-				+0.1
3,357,249	-		RR42_RS15540	0.23	-0.8
3,357,350	-		RR42_RS15540	0.30	+0.2
3,357,577	-		RR42_RS15540	0.46	-1.3
3,357,601	+		RR42_RS15540	0.48	-1.1
3,357,602	-		RR42_RS15540	0.48	-0.3
3,357,691	+		RR42_RS15540	0.54	+0.0
3,357,691	+		RR42_RS15540	0.54	+0.0
3,357,692	-		RR42_RS15540	0.54	+0.3
3,357,835	-		RR42_RS15540	0.64	+0.4
3,357,858	+		RR42_RS15540	0.66	+0.4
3,357,859	-		RR42_RS15540	0.66	+0.1
3,357,952	+		RR42_RS15540	0.72	-2.0
3,357,953	-		RR42_RS15540	0.72	-0.3
3,357,953	-		RR42_RS15540	0.72	+0.6
3,358,057	+		RR42_RS15540	0.80	-0.3
3,358,124	+		RR42_RS15540	0.84	+1.2
3,358,124	+		RR42_RS15540	0.84	+0.5
3,358,125	-		RR42_RS15540	0.84	+0.1
3,358,125	-		RR42_RS15540	0.84	-0.6
3,358,125	-		RR42_RS15540	0.84	+0.5
3,358,181	+		RR42_RS15540	0.88	+0.0
3,358,181	+		RR42_RS15540	0.88	-2.1
3,358,385	+				+0.1
3,358,385	+				+0.4
3,358,385	+				+0.8
3,358,386	-				+1.3
3,358,386	-				-0.1
3,358,487	-		RR42_RS15545	0.17	+0.6
3,358,500	+		RR42_RS15545	0.20	+0.6
3,358,501	-		RR42_RS15545	0.20	-0.1
3,358,501	-		RR42_RS15545	0.20	+0.9
3,358,519	+		RR42_RS15545	0.24	-0.6
3,358,520	-		RR42_RS15545	0.24	+0.2
3,358,520	-		RR42_RS15545	0.24	+0.5
3,358,520	-		RR42_RS15545	0.24	-0.9
3,358,520	-		RR42_RS15545	0.24	-2.9
3,359,093	-		RR42_RS15550	0.39	+0.5
3,359,255	+		RR42_RS15550	0.67	+0.4
3,359,255	+		RR42_RS15550	0.67	+0.5
3,359,255	+		RR42_RS15550	0.67	+0.1
3,359,256	-		RR42_RS15550	0.68	-0.8
3,359,256	-		RR42_RS15550	0.68	-0.0
3,359,256	-		RR42_RS15550	0.68	+0.1