Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS13210

Experiment: R2A with Cisplatin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Cisplatin 0.001 mg/ml
2,844,799	+		RR42_RS13205	0.15	-0.6
2,844,910	+		RR42_RS13205	0.27	-0.4
2,844,911	-		RR42_RS13205	0.27	+0.9
2,844,911	-		RR42_RS13205	0.27	-1.6
2,845,018	+		RR42_RS13205	0.38	-2.3
2,845,018	+		RR42_RS13205	0.38	+1.7
2,845,018	+		RR42_RS13205	0.38	-0.1
2,845,019	-		RR42_RS13205	0.38	+1.5
2,845,219	+		RR42_RS13205	0.58	+0.7
2,845,220	-		RR42_RS13205	0.59	+0.4
2,845,220	-		RR42_RS13205	0.59	-0.1
2,845,220	-		RR42_RS13205	0.59	+0.2
2,845,220	-		RR42_RS13205	0.59	+0.1
2,845,220	-		RR42_RS13205	0.59	+0.7
2,845,285	+		RR42_RS13205	0.65	-0.9
2,845,285	+		RR42_RS13205	0.65	+1.5
2,845,285	+		RR42_RS13205	0.65	+2.0
2,845,285	+		RR42_RS13205	0.65	+0.6
2,845,285	+		RR42_RS13205	0.65	+0.2
2,845,285	+		RR42_RS13205	0.65	-0.4
2,845,285	+		RR42_RS13205	0.65	-0.1
2,845,285	+		RR42_RS13205	0.65	+0.7
2,845,285	+		RR42_RS13205	0.65	+0.5
2,845,286	-		RR42_RS13205	0.65	+0.3
2,845,306	+		RR42_RS13205	0.67	+0.5
2,845,306	+		RR42_RS13205	0.67	-0.3
2,845,306	+		RR42_RS13205	0.67	+0.7
2,845,306	+		RR42_RS13205	0.67	+1.1
2,845,307	-		RR42_RS13205	0.67	+0.1
2,845,348	+		RR42_RS13205	0.72	-1.7
2,845,530	+				+0.4
2,845,530	+				+0.9
2,845,530	+				-0.2
2,845,531	-				-0.2
2,845,531	-				-1.8
2,845,782	-				+0.4
2,845,850	+		RR42_RS13210	0.11	+0.8
2,845,850	+		RR42_RS13210	0.11	-0.3
2,845,850	+		RR42_RS13210	0.11	+0.7
2,845,851	-		RR42_RS13210	0.11	-1.8
2,845,953	-		RR42_RS13210	0.21	-0.9
2,845,998	-		RR42_RS13210	0.25	-0.1
2,845,998	-		RR42_RS13210	0.25	+0.2
2,845,998	-		RR42_RS13210	0.25	-0.4
2,845,998	-		RR42_RS13210	0.25	+1.5
2,845,998	-		RR42_RS13210	0.25	+0.4
2,846,001	+		RR42_RS13210	0.25	+0.7
2,846,001	+		RR42_RS13210	0.25	+0.9
2,846,001	+		RR42_RS13210	0.25	+1.0
2,846,002	-		RR42_RS13210	0.25	+0.8
2,846,002	-		RR42_RS13210	0.25	+1.4
2,846,045	+		RR42_RS13210	0.30	-0.0
2,846,063	+		RR42_RS13210	0.31	+1.0
2,846,087	+		RR42_RS13210	0.34	+0.4
2,846,088	-		RR42_RS13210	0.34	-0.7
2,846,204	+		RR42_RS13210	0.45	+0.5
2,846,205	-		RR42_RS13210	0.45	+0.4
2,846,205	-		RR42_RS13210	0.45	-2.5
2,846,222	+		RR42_RS13210	0.46	+1.2
2,846,223	-		RR42_RS13210	0.46	+0.4
2,846,223	-		RR42_RS13210	0.46	-0.1
2,846,384	+		RR42_RS13210	0.62	+0.6
2,846,385	-		RR42_RS13210	0.62	+0.7
2,846,429	+		RR42_RS13210	0.66	+0.5
2,846,429	+		RR42_RS13210	0.66	-0.5
2,846,430	-		RR42_RS13210	0.66	+0.5
2,846,430	-		RR42_RS13210	0.66	+0.6
2,846,430	-		RR42_RS13210	0.66	-0.3
2,846,430	-		RR42_RS13210	0.66	-1.2
2,846,430	-		RR42_RS13210	0.66	+2.2
2,846,455	+		RR42_RS13210	0.68	+0.5
2,846,455	+		RR42_RS13210	0.68	+0.8
2,846,468	+		RR42_RS13210	0.69	-3.2
2,846,468	+		RR42_RS13210	0.69	-0.5
2,846,469	-		RR42_RS13210	0.70	+0.4
2,846,682	-		RR42_RS13210	0.90	+1.2
2,846,778	-				-0.7
2,846,867	+				+0.1
2,846,867	+				+0.6
2,846,867	+				+1.0
2,846,867	+				-1.1
2,846,868	-				+0.9
2,846,868	-				-0.4
2,846,868	-				+0.5
2,846,868	-				-0.0
2,846,868	-				+0.6
2,846,975	+				-0.2
2,846,975	+				-1.7
2,846,976	-				+0.0
2,846,976	-				+1.4
2,846,976	-				+0.6
2,846,976	-				+1.0
2,846,976	-				+0.6
2,847,138	+		RR42_RS13215	0.12	+1.4
2,847,138	+		RR42_RS13215	0.12	+0.2
2,847,138	+		RR42_RS13215	0.12	+0.1
2,847,138	+		RR42_RS13215	0.12	-0.2
2,847,138	+		RR42_RS13215	0.12	+0.5
2,847,138	+		RR42_RS13215	0.12	+0.8
2,847,139	-		RR42_RS13215	0.12	+0.2
2,847,139	-		RR42_RS13215	0.12	+1.2
2,847,139	-		RR42_RS13215	0.12	+0.7
2,847,139	-		RR42_RS13215	0.12	+0.8
2,847,139	-		RR42_RS13215	0.12	+2.1
2,847,344	-		RR42_RS13215	0.42	+0.6
2,847,398	+		RR42_RS13215	0.49	-0.0
2,847,452	-		RR42_RS13215	0.57	+1.0
2,847,452	-		RR42_RS13215	0.57	+0.1
2,847,628	+		RR42_RS13215	0.82	+0.1
2,847,628	+		RR42_RS13215	0.82	+0.1
2,847,629	-		RR42_RS13215	0.83	+1.1
2,847,698	-				+0.3