Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS11595

Experiment: R2A with Cisplatin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Cisplatin 0.001 mg/ml
2,481,203	-		RR42_RS11590	0.23	+0.1
2,481,221	-		RR42_RS11590	0.27	-0.0
2,481,239	+		RR42_RS11590	0.30	+0.9
2,481,242	-		RR42_RS11590	0.30	+0.1
2,481,242	-		RR42_RS11590	0.30	+0.1
2,481,242	-		RR42_RS11590	0.30	-0.3
2,481,242	-		RR42_RS11590	0.30	+0.9
2,481,242	-		RR42_RS11590	0.30	+0.8
2,481,242	-		RR42_RS11590	0.30	-0.0
2,481,295	+		RR42_RS11590	0.39	+0.1
2,481,296	-		RR42_RS11590	0.40	+0.3
2,481,325	+		RR42_RS11590	0.45	-0.1
2,481,325	+		RR42_RS11590	0.45	-0.2
2,481,325	+		RR42_RS11590	0.45	+0.1
2,481,326	-		RR42_RS11590	0.45	-1.6
2,481,326	-		RR42_RS11590	0.45	+0.3
2,481,326	-		RR42_RS11590	0.45	+0.4
2,481,326	-		RR42_RS11590	0.45	-0.7
2,481,403	+		RR42_RS11590	0.58	+0.1
2,481,403	+		RR42_RS11590	0.58	+0.6
2,481,403	+		RR42_RS11590	0.58	-2.1
2,481,403	+		RR42_RS11590	0.58	-2.8
2,481,404	-		RR42_RS11590	0.58	+0.2
2,481,404	-		RR42_RS11590	0.58	-1.6
2,481,404	-		RR42_RS11590	0.58	-0.3
2,481,449	+		RR42_RS11590	0.66	+0.4
2,481,525	+		RR42_RS11590	0.80	+0.3
2,481,720	+				+0.1
2,481,721	-				+0.6
2,481,728	+				+0.3
2,481,729	-				-0.1
2,481,792	+				+1.3
2,481,793	-				-0.8
2,481,884	-				-0.8
2,481,884	-				+0.1
2,482,063	+				-1.0
2,482,064	-				-0.4
2,482,158	+				+0.5
2,482,158	+				-0.0
2,482,201	+		RR42_RS11595	0.14	+0.8
2,482,202	-		RR42_RS11595	0.14	-0.1
2,482,218	+		RR42_RS11595	0.19	+0.4
2,482,316	+		RR42_RS11595	0.50	-0.4
2,482,317	-		RR42_RS11595	0.50	+0.8
2,482,371	-		RR42_RS11595	0.67	-0.1
2,482,371	-		RR42_RS11595	0.67	-0.2
2,482,398	+		RR42_RS11595	0.75	+0.9
2,482,398	+		RR42_RS11595	0.75	+0.3
2,482,423	-		RR42_RS11595	0.83	-0.1
2,482,449	+				-2.2
2,482,451	+				-0.6
2,482,452	-				+0.4
2,482,461	-				-0.1
2,482,473	+				+0.7
2,482,537	-				+0.8
2,482,537	-				-0.1
2,482,537	-				-0.1
2,482,593	+				+0.2
2,482,593	+				+0.6
2,482,598	+				+0.2
2,482,663	+				+0.0
2,482,745	+				+1.0
2,482,781	+				+0.5
2,482,820	+				+0.2
2,482,887	+				-0.2
2,482,976	+				-0.9
2,483,010	+				+0.2
2,483,010	+				-0.5
2,483,011	-				-0.3
2,483,011	-				-0.2
2,483,080	-				-0.3
2,483,080	-				+0.6
2,483,080	-				+0.2
2,483,082	+				+0.2
2,483,087	-				+0.1
2,483,156	+		RR42_RS11600	0.13	-0.3
2,483,227	-		RR42_RS11600	0.26	-0.2
2,483,275	-		RR42_RS11600	0.35	-2.5
2,483,275	-		RR42_RS11600	0.35	-0.0
2,483,275	-		RR42_RS11600	0.35	-0.4
2,483,314	+		RR42_RS11600	0.42	+0.0
2,483,315	-		RR42_RS11600	0.42	-0.6
2,483,361	-		RR42_RS11600	0.51	-3.4