Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS10190

Experiment: R2A with Cisplatin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Cisplatin 0.001 mg/ml
2,180,921	+		RR42_RS10185	0.47	+0.1
2,180,921	+		RR42_RS10185	0.47	+0.2
2,180,921	+		RR42_RS10185	0.47	+0.1
2,180,948	+		RR42_RS10185	0.49	-0.5
2,180,948	+		RR42_RS10185	0.49	-0.2
2,180,972	-		RR42_RS10185	0.51	+0.5
2,180,972	-		RR42_RS10185	0.51	-0.4
2,181,043	+		RR42_RS10185	0.56	+0.1
2,181,062	+		RR42_RS10185	0.58	+0.4
2,181,062	+		RR42_RS10185	0.58	-0.3
2,181,132	+		RR42_RS10185	0.63	+0.1
2,181,133	-		RR42_RS10185	0.63	-0.3
2,181,133	-		RR42_RS10185	0.63	+0.3
2,181,133	-		RR42_RS10185	0.63	-0.6
2,181,133	-		RR42_RS10185	0.63	-2.2
2,181,146	+		RR42_RS10185	0.64	+0.4
2,181,171	-		RR42_RS10185	0.66	-2.0
2,181,212	+		RR42_RS10185	0.69	+0.4
2,181,212	+		RR42_RS10185	0.69	-0.9
2,181,222	-		RR42_RS10185	0.70	-0.0
2,181,222	-		RR42_RS10185	0.70	+0.5
2,181,222	-		RR42_RS10185	0.70	+1.1
2,181,222	-		RR42_RS10185	0.70	+0.5
2,181,276	-		RR42_RS10185	0.74	-1.0
2,181,276	-		RR42_RS10185	0.74	+0.1
2,181,276	-		RR42_RS10185	0.74	+0.0
2,181,276	-		RR42_RS10185	0.74	-0.2
2,181,276	-		RR42_RS10185	0.74	+1.3
2,181,284	+		RR42_RS10185	0.75	+0.2
2,181,284	+		RR42_RS10185	0.75	-0.4
2,181,293	+		RR42_RS10185	0.75	-0.0
2,181,294	-		RR42_RS10185	0.75	+0.3
2,181,452	+		RR42_RS10185	0.87	-0.4
2,181,491	+				+0.5
2,181,492	-				+0.6
2,181,492	-				-0.5
2,181,497	+				-0.5
2,181,498	-				-0.1
2,181,508	-				+0.2
2,181,922	+				+0.3
2,181,923	-				+0.3
2,181,983	+		RR42_RS10190	0.13	-0.4
2,181,983	+		RR42_RS10190	0.13	+0.7
2,181,984	-		RR42_RS10190	0.13	-0.3
2,181,987	+		RR42_RS10190	0.14	+0.0
2,181,988	-		RR42_RS10190	0.14	+1.2
2,182,149	+		RR42_RS10190	0.39	-0.5
2,182,165	+		RR42_RS10190	0.42	+0.4
2,182,166	-		RR42_RS10190	0.42	-0.7
2,182,166	-		RR42_RS10190	0.42	+0.7
2,182,166	-		RR42_RS10190	0.42	-0.8
2,182,166	-		RR42_RS10190	0.42	+0.8
2,182,213	+		RR42_RS10190	0.49	+0.6
2,182,235	-		RR42_RS10190	0.52	+0.4
2,182,359	+		RR42_RS10190	0.72	-1.4
2,182,556	+				-0.4
2,182,556	+				-0.3
2,182,557	-				+0.1
2,182,557	-				-0.9
2,182,557	-				+0.2
2,182,622	+				+0.8
2,182,631	+		RR42_RS10195	0.11	+0.1
2,182,632	-		RR42_RS10195	0.11	+1.6
2,183,343	+				-0.6
2,183,410	+				+0.5
2,183,410	+				+0.5
2,183,500	-				+0.5