Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS09940

Experiment: R2A with Cisplatin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Cisplatin 0.001 mg/ml
2,120,039	-		RR42_RS09935	0.72	-0.4
2,120,100	-		RR42_RS09935	0.79	+0.1
2,120,155	+		RR42_RS09935	0.85	+0.9
2,120,156	-		RR42_RS09935	0.85	+0.6
2,120,156	-		RR42_RS09935	0.85	+0.1
2,120,156	-		RR42_RS09935	0.85	-0.0
2,120,254	+				-1.2
2,120,255	-				-0.2
2,120,267	+				+0.1
2,120,267	+				+0.1
2,120,267	+				-1.1
2,120,457	+				-0.2
2,120,513	+				-0.3
2,120,513	+				-0.1
2,120,513	+				-0.1
2,120,513	+				+0.2
2,120,513	+				-0.9
2,120,513	+				+0.8
2,120,513	+				-0.1
2,120,572	+				+0.0
2,120,642	-				+0.4
2,120,683	+				+0.7
2,120,684	-				+0.3
2,120,684	-				-0.4
2,120,684	-				+0.3
2,120,689	-				-0.4
2,120,689	-				+0.3
2,120,689	-				+0.3
2,120,693	-				+0.9
2,120,763	+				+0.1
2,120,887	+				-0.1
2,120,943	+				-0.7
2,120,943	+				-0.8
2,120,967	+				-2.3
2,120,967	+				-0.3
2,120,968	-				-1.8
2,121,016	+		RR42_RS09940	0.12	+1.1
2,121,017	-		RR42_RS09940	0.12	-1.2
2,121,097	+		RR42_RS09940	0.21	-0.3
2,121,097	+		RR42_RS09940	0.21	+0.5
2,121,099	+		RR42_RS09940	0.21	+0.5
2,121,099	+		RR42_RS09940	0.21	-1.1
2,121,099	+		RR42_RS09940	0.21	+0.2
2,121,100	-		RR42_RS09940	0.21	+0.3
2,121,100	-		RR42_RS09940	0.21	-0.2
2,121,100	-		RR42_RS09940	0.21	-0.6
2,121,100	-		RR42_RS09940	0.21	+0.5
2,121,259	+		RR42_RS09940	0.38	+0.3
2,121,270	+		RR42_RS09940	0.39	+0.2
2,121,270	+		RR42_RS09940	0.39	+0.5
2,121,270	+		RR42_RS09940	0.39	+0.2
2,121,270	+		RR42_RS09940	0.39	-1.9
2,121,270	+		RR42_RS09940	0.39	-0.2
2,121,270	+		RR42_RS09940	0.39	-0.1
2,121,270	+		RR42_RS09940	0.39	-0.7
2,121,270	+		RR42_RS09940	0.39	+0.5
2,121,271	-		RR42_RS09940	0.39	+0.5
2,121,271	-		RR42_RS09940	0.39	-0.8
2,121,271	-		RR42_RS09940	0.39	+0.2
2,121,272	+		RR42_RS09940	0.39	-0.3
2,121,272	+		RR42_RS09940	0.39	+1.5
2,121,272	+		RR42_RS09940	0.39	+0.6
2,121,273	-		RR42_RS09940	0.39	+0.7
2,121,273	-		RR42_RS09940	0.39	+0.6
2,121,367	-		RR42_RS09940	0.49	+0.3
2,121,402	+		RR42_RS09940	0.53	-0.1
2,121,402	+		RR42_RS09940	0.53	+0.4
2,121,403	-		RR42_RS09940	0.53	-1.8
2,121,403	-		RR42_RS09940	0.53	-0.0
2,121,430	-		RR42_RS09940	0.56	-0.1
2,121,451	+		RR42_RS09940	0.58	-0.2
2,121,452	-		RR42_RS09940	0.58	+0.2
2,121,452	-		RR42_RS09940	0.58	-0.2
2,121,452	-		RR42_RS09940	0.58	+0.6
2,121,508	-		RR42_RS09940	0.64	+0.8
2,121,607	+		RR42_RS09940	0.75	+0.6
2,122,319	+				-0.9
2,122,320	-				+0.4
2,122,560	+				-0.2
2,122,603	+				-0.7
2,122,604	-				-0.7
2,122,621	+				-1.1
2,122,622	-				-0.3
2,122,675	-				+0.5
2,122,675	-				-0.0
2,122,675	-				-0.5
2,122,675	-				+0.8
2,122,677	-				-1.0
2,122,677	-				-0.2