Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS08280

Experiment: R2A with Cisplatin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Cisplatin 0.001 mg/ml
1,754,570	-				+0.5
1,754,570	-				+1.3
1,754,594	-				-0.1
1,754,594	-				+0.5
1,754,612	+				+0.1
1,754,656	-				-2.1
1,754,656	-				-0.3
1,754,832	+		RR42_RS08275	0.21	+1.0
1,754,846	-		RR42_RS08275	0.23	+1.0
1,754,993	-		RR42_RS08275	0.39	+0.3
1,754,993	-		RR42_RS08275	0.39	+0.7
1,755,096	+		RR42_RS08275	0.50	-1.7
1,755,120	+		RR42_RS08275	0.53	+0.8
1,755,120	+		RR42_RS08275	0.53	+0.9
1,755,121	-		RR42_RS08275	0.53	-0.1
1,755,379	+		RR42_RS08275	0.81	+1.1
1,755,380	-		RR42_RS08275	0.81	+0.9
1,755,380	-		RR42_RS08275	0.81	+0.4
1,755,380	-		RR42_RS08275	0.81	+0.4
1,755,424	+		RR42_RS08275	0.86	+0.6
1,755,425	-		RR42_RS08275	0.86	-0.7
1,755,548	-				-2.5
1,755,550	+				-1.4
1,755,550	+				+0.7
1,755,551	-				+1.0
1,755,551	-				-1.1
1,755,562	-				-0.1
1,755,667	+		RR42_RS08280	0.52	+1.1
1,755,667	+		RR42_RS08280	0.52	+0.3
1,755,779	+				-1.6
1,755,780	-				+0.5
1,755,821	+				+0.6
1,755,843	-				-0.1
1,755,843	-				+0.9
1,755,890	+		RR42_RS08285	0.11	+0.1
1,755,988	+		RR42_RS08285	0.31	+0.3
1,755,988	+		RR42_RS08285	0.31	+0.4
1,755,988	+		RR42_RS08285	0.31	-1.1
1,755,988	+		RR42_RS08285	0.31	+0.2
1,755,988	+		RR42_RS08285	0.31	-0.3
1,755,989	-		RR42_RS08285	0.31	+0.1
1,756,094	+		RR42_RS08285	0.52	+0.9
1,756,095	-		RR42_RS08285	0.52	+0.9
1,756,259	+		RR42_RS08285	0.85	+0.9
1,756,260	-		RR42_RS08285	0.86	+0.3
1,756,260	-		RR42_RS08285	0.86	-0.4
1,756,484	+				-0.2
1,756,636	+				+0.5
1,756,637	-				+1.4
1,756,637	-				+1.5
1,756,712	+				-0.4