Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS06125

Experiment: R2A with Cisplatin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Cisplatin 0.001 mg/ml
1,344,640	-		RR42_RS06120	0.58	-1.1
1,344,970	-				-0.2
1,344,970	-				+0.1
1,345,008	+				-0.5
1,345,009	-				-0.7
1,345,009	-				+0.6
1,345,009	-				-1.3
1,345,119	-				+0.1
1,345,122	+				+0.2
1,345,122	+				+0.4
1,345,132	-				+0.3
1,345,135	-				-0.7
1,345,187	+				-0.8
1,345,212	-				-0.5
1,345,261	-				+0.4
1,345,262	+				+0.3
1,345,262	+				-1.1
1,345,263	-				-0.5
1,345,305	+				-0.7
1,345,306	-				+0.7
1,345,306	-				-1.8
1,345,306	-				-0.4
1,345,306	-				-0.2
1,345,438	-				-1.2
1,345,438	-				-1.4
1,345,590	+		RR42_RS06125	0.12	-2.1
1,345,591	-		RR42_RS06125	0.12	-1.4
1,346,034	-		RR42_RS06125	0.36	-0.2
1,346,034	-		RR42_RS06125	0.36	-0.7
1,346,034	-		RR42_RS06125	0.36	-1.8
1,346,034	-		RR42_RS06125	0.36	-0.7
1,346,041	-		RR42_RS06125	0.36	+0.2
1,346,091	-		RR42_RS06125	0.39	-1.4
1,347,244	-				+1.2
1,347,244	-				+0.4
1,347,439	+				+0.6
1,347,439	+				-0.1
1,347,439	+				+0.3
1,347,439	+				-1.2
1,347,439	+				-0.1
1,347,439	+				+0.4
1,347,439	+				-0.7
1,347,439	+				+0.1
1,347,440	-				+1.8
1,347,663	+		RR42_RS06130	0.45	+0.1
1,347,734	-		RR42_RS06130	0.59	+0.0
1,347,734	-		RR42_RS06130	0.59	+0.4
1,347,734	-		RR42_RS06130	0.59	-0.1
1,347,734	-		RR42_RS06130	0.59	+0.7
1,347,989	+				+0.2
1,347,990	-				-0.3
1,348,039	+				+0.8
1,348,040	-				-0.5
1,348,040	-				-0.6
1,348,040	-				-0.2
1,348,040	-				-0.0
1,348,040	-				-0.2
1,348,040	-				+0.3
1,348,040	-				+0.3
1,348,040	-				-1.9
1,348,043	+				-1.3
1,348,043	+				-3.9
1,348,044	-				+0.1
1,348,044	-				+0.9
1,348,048	+				-1.3
1,348,048	+				-0.7
1,348,049	-				+0.3
1,348,049	-				+0.6
1,348,051	-				+0.4