Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS06090

Experiment: R2A with Cisplatin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Cisplatin 0.001 mg/ml
1,334,834	-				+0.8
1,334,912	+				+1.5
1,335,005	+				-0.8
1,335,006	-				-1.5
1,335,006	-				-2.4
1,335,006	-				-1.5
1,335,006	-				-0.2
1,335,009	+				-0.1
1,335,009	+				-1.8
1,335,010	-				-1.8
1,335,010	-				-1.5
1,335,010	-				-0.1
1,335,141	+		RR42_RS06085	0.17	-1.0
1,335,141	+		RR42_RS06085	0.17	+0.4
1,335,171	+		RR42_RS06085	0.22	-0.6
1,335,171	+		RR42_RS06085	0.22	-0.1
1,335,172	-		RR42_RS06085	0.22	-0.3
1,335,172	-		RR42_RS06085	0.22	+0.9
1,335,172	-		RR42_RS06085	0.22	+0.2
1,335,579	+		RR42_RS06085	0.78	+0.2
1,335,622	+		RR42_RS06085	0.84	-0.4
1,335,623	-		RR42_RS06085	0.84	-1.1
1,335,904	-				-3.4
1,336,321	+		RR42_RS06090	0.33	-4.1
1,336,395	-		RR42_RS06090	0.37	-3.2
1,336,560	+		RR42_RS06090	0.47	-2.9
1,336,870	+		RR42_RS06090	0.65	-2.1
1,336,870	+		RR42_RS06090	0.65	-2.9
1,336,871	-		RR42_RS06090	0.65	-2.4
1,337,146	+		RR42_RS06090	0.82	-3.9
1,337,147	-		RR42_RS06090	0.82	-2.4
1,337,218	+		RR42_RS06090	0.86	-2.8
1,337,219	-		RR42_RS06090	0.86	-2.3
1,337,269	+		RR42_RS06090	0.89	-4.4
1,337,495	-				+0.2
1,337,495	-				+0.3
1,337,974	+		RR42_RS06095	0.44	-2.6
1,338,050	+		RR42_RS06095	0.50	-1.9
1,338,350	-		RR42_RS06095	0.77	-0.7