Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS05945

Experiment: R2A with Cisplatin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Cisplatin 0.001 mg/ml
1,307,820	-		RR42_RS05935	0.72	+3.0
1,307,857	+				-2.3
1,307,857	+				+0.1
1,307,857	+				+0.7
1,307,858	-				-0.1
1,307,858	-				-0.3
1,307,858	-				+0.7
1,307,858	-				+0.4
1,307,968	+				-2.1
1,307,968	+				+1.1
1,307,968	+				-2.2
1,307,968	+				-0.9
1,307,969	-				+0.9
1,307,969	-				+0.1
1,307,969	-				-0.7
1,307,969	-				+0.8
1,307,977	+				-0.4
1,307,978	-				+0.6
1,307,999	+				-1.9
1,308,070	-				+0.4
1,308,070	-				-0.0
1,308,071	+				-1.3
1,308,071	+				-0.1
1,308,071	+				-0.8
1,308,071	+				-0.9
1,308,071	+				-0.7
1,308,125	+				-1.6
1,308,693	+				-0.3
1,308,784	+				-1.0
1,308,784	+				-0.3
1,308,784	+				+0.0
1,308,784	+				+0.5
1,308,785	-				-0.4
1,308,785	-				-1.4
1,308,785	-				+0.1
1,309,005	+		RR42_RS05945	0.47	+1.4
1,309,006	-		RR42_RS05945	0.47	-0.2
1,309,052	+		RR42_RS05945	0.58	+0.6
1,309,052	+		RR42_RS05945	0.58	+0.3
1,309,291	+				-0.3
1,309,292	-				-0.2
1,309,292	-				+0.2
1,309,324	+				+0.6
1,309,324	+				-0.8
1,309,325	-				+0.6
1,309,340	-				-1.5
1,309,375	+		RR42_RS05950	0.11	-1.3
1,309,376	-		RR42_RS05950	0.11	+0.3
1,309,376	-		RR42_RS05950	0.11	+0.0
1,309,376	-		RR42_RS05950	0.11	+0.4
1,309,402	+		RR42_RS05950	0.13	-1.3
1,309,405	+		RR42_RS05950	0.13	+0.9
1,309,406	-		RR42_RS05950	0.14	-0.9
1,309,406	-		RR42_RS05950	0.14	+0.1
1,309,406	-		RR42_RS05950	0.14	+0.2
1,309,483	+		RR42_RS05950	0.20	-0.0
1,309,528	+		RR42_RS05950	0.23	+0.4
1,309,528	+		RR42_RS05950	0.23	+0.3
1,309,528	+		RR42_RS05950	0.23	+0.4
1,309,529	-		RR42_RS05950	0.24	-0.5
1,309,529	-		RR42_RS05950	0.24	+0.4
1,309,529	-		RR42_RS05950	0.24	-0.8
1,309,531	+		RR42_RS05950	0.24	+0.2
1,309,531	+				+0.3
1,309,531	+		RR42_RS05950	0.24	+0.8
1,309,532	-		RR42_RS05950	0.24	+0.1
1,309,532	-		RR42_RS05950	0.24	+0.4
1,309,532	-		RR42_RS05950	0.24	+0.7
1,309,534	+		RR42_RS05950	0.24	+0.3
1,309,534	+		RR42_RS05950	0.24	+0.6
1,309,535	-		RR42_RS05950	0.24	-0.7
1,309,535	-		RR42_RS05950	0.24	+0.1
1,309,535	-		RR42_RS05950	0.24	-0.1
1,309,569	+		RR42_RS05950	0.27	+0.2
1,309,569	+		RR42_RS05950	0.27	-0.8
1,309,569	+		RR42_RS05950	0.27	-0.0
1,309,569	+		RR42_RS05950	0.27	-1.4
1,309,569	+		RR42_RS05950	0.27	-0.6
1,309,569	+		RR42_RS05950	0.27	+0.4
1,309,570	-		RR42_RS05950	0.27	-0.2
1,309,570	-		RR42_RS05950	0.27	-0.5
1,309,570	-		RR42_RS05950	0.27	-0.3
1,309,607	+		RR42_RS05950	0.30	+0.1
1,309,608	-		RR42_RS05950	0.30	+0.1
1,309,608	-		RR42_RS05950	0.30	-0.3
1,309,717	+		RR42_RS05950	0.39	+0.2
1,309,717	+		RR42_RS05950	0.39	+0.1
1,309,718	-		RR42_RS05950	0.39	-1.7
1,309,720	+		RR42_RS05950	0.39	-0.9
1,309,720	+		RR42_RS05950	0.39	+0.1
1,309,720	+		RR42_RS05950	0.39	+0.1
1,309,721	-		RR42_RS05950	0.39	+0.6
1,309,721	-		RR42_RS05950	0.39	-0.4
1,309,721	-		RR42_RS05950	0.39	+0.3
1,309,807	+		RR42_RS05950	0.46	-0.6
1,309,852	+		RR42_RS05950	0.50	-0.1
1,309,852	+		RR42_RS05950	0.50	-0.3
1,309,853	-		RR42_RS05950	0.50	-4.3
1,309,853	-		RR42_RS05950	0.50	-0.8
1,309,853	-		RR42_RS05950	0.50	-0.4
1,309,918	+		RR42_RS05950	0.55	-1.9
1,309,918	+		RR42_RS05950	0.55	-0.8
1,309,918	+		RR42_RS05950	0.55	-1.3
1,309,919	-		RR42_RS05950	0.55	+0.3
1,310,197	+		RR42_RS05950	0.78	+1.0
1,310,197	+		RR42_RS05950	0.78	-0.7
1,310,197	+		RR42_RS05950	0.78	+0.3
1,310,198	-		RR42_RS05950	0.78	+0.4