Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS05890

Experiment: R2A with Cisplatin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Cisplatin 0.001 mg/ml
1,295,248	+		RR42_RS05885	0.84	+0.6
1,295,248	+		RR42_RS05885	0.84	-2.5
1,295,248	+		RR42_RS05885	0.84	-0.6
1,295,249	-		RR42_RS05885	0.84	-0.9
1,295,249	-		RR42_RS05885	0.84	-0.1
1,295,250	-		RR42_RS05885	0.84	-0.3
1,295,272	-		RR42_RS05885	0.84	+0.1
1,295,713	+				-0.9
1,295,713	+				-0.3
1,295,713	+				-2.5
1,295,714	-				-2.2
1,295,714	-				-1.2
1,295,714	-				-0.9
1,295,714	-				+0.4
1,295,717	+				-1.2
1,295,718	-				+0.6
1,296,090	+				-0.9
1,296,090	+				-0.5
1,296,091	-				+0.9
1,296,091	-				-0.6
1,296,091	-				+1.0
1,296,091	-				+1.2
1,296,094	-				+0.4
1,296,094	-				-0.4
1,296,173	-				-1.1
1,296,173	-				+0.2
1,296,372	+				+0.6
1,296,372	+				-0.6
1,296,373	-				-1.9
1,296,385	-				+0.1
1,296,385	-				+0.7
1,296,385	-				-0.4
1,296,393	+				+0.5
1,296,393	+				-0.9
1,296,394	-				-0.3
1,296,660	+		RR42_RS05890	0.16	+0.3
1,296,699	+		RR42_RS05890	0.18	-0.6
1,296,700	-		RR42_RS05890	0.18	+0.2
1,296,816	+		RR42_RS05890	0.21	+0.4
1,296,816	+		RR42_RS05890	0.21	-0.2
1,296,817	-		RR42_RS05890	0.22	-0.9
1,296,871	-		RR42_RS05890	0.23	-1.2
1,296,871	-		RR42_RS05890	0.23	-2.0
1,296,871	-		RR42_RS05890	0.23	-0.6
1,296,930	+		RR42_RS05890	0.25	+0.6
1,296,930	+		RR42_RS05890	0.25	-0.4
1,296,931	-		RR42_RS05890	0.25	-0.7
1,296,931	-		RR42_RS05890	0.25	-0.4
1,297,011	+		RR42_RS05890	0.28	-0.7
1,297,011	+		RR42_RS05890	0.28	-0.3
1,297,044	+		RR42_RS05890	0.29	+0.0
1,297,044	+		RR42_RS05890	0.29	-0.8
1,297,045	-		RR42_RS05890	0.29	+0.7
1,297,488	+		RR42_RS05890	0.44	+0.2
1,297,488	+		RR42_RS05890	0.44	-0.1
1,297,488	+		RR42_RS05890	0.44	-0.9
1,298,025	+		RR42_RS05890	0.62	-0.1
1,298,025	+		RR42_RS05890	0.62	-0.4
1,298,025	+		RR42_RS05890	0.62	-1.4
1,298,419	-		RR42_RS05890	0.76	-0.7
1,298,451	+		RR42_RS05890	0.77	-0.2
1,298,461	-		RR42_RS05890	0.77	-2.6
1,298,859	+				-0.0
1,298,859	-				+0.7
1,298,860	-				-2.0
1,298,860	-				-0.0
1,298,860	-				+0.1
1,298,860	-				-0.2
1,298,860	-				-1.0
1,299,195	+				-1.0
1,299,229	+		RR42_RS05895	0.14	-1.0
1,299,229	+		RR42_RS05895	0.14	-0.2
1,299,263	+		RR42_RS05895	0.20	-1.1
1,299,721	-				+1.2
1,299,771	-				-0.5
1,300,074	-		RR42_RS05900	0.14	+0.5
1,300,074	-		RR42_RS05900	0.14	-0.0
1,300,074	-		RR42_RS05900	0.14	+0.6
1,300,074	-		RR42_RS05900	0.14	-0.3