Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3600

Experiment: dimethyl sulfone 0.25 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	dimethyl sulfone 0.25 M
4,188,986	+		Pf6N2E2_3599	0.23	-1.3
4,188,987	-		Pf6N2E2_3599	0.23	-0.5
4,189,073	+		Pf6N2E2_3599	0.32	-0.0
4,189,162	+		Pf6N2E2_3599	0.42	-0.0
4,189,268	+		Pf6N2E2_3599	0.53	+1.9
4,189,268	+		Pf6N2E2_3599	0.53	-1.3
4,189,268	+		Pf6N2E2_3599	0.53	-0.9
4,189,268	+		Pf6N2E2_3599	0.53	+0.7
4,189,270	+		Pf6N2E2_3599	0.54	+0.3
4,189,336	-		Pf6N2E2_3599	0.61	-0.8
4,189,336	-		Pf6N2E2_3599	0.61	+0.7
4,189,456	+		Pf6N2E2_3599	0.74	-1.5
4,189,457	-		Pf6N2E2_3599	0.74	-0.3
4,189,530	+		Pf6N2E2_3599	0.82	-0.2
4,189,530	+		Pf6N2E2_3599	0.82	-0.3
4,189,530	+		Pf6N2E2_3599	0.82	-0.6
4,189,531	-		Pf6N2E2_3599	0.82	-0.0
4,189,531	-		Pf6N2E2_3599	0.82	-1.3
4,189,531	-		Pf6N2E2_3599	0.82	+0.9
4,189,552	+		Pf6N2E2_3599	0.84	+0.6
4,189,553	-		Pf6N2E2_3599	0.84	-0.9
4,189,553	-		Pf6N2E2_3599	0.84	-0.4
4,189,553	-		Pf6N2E2_3599	0.84	+0.2
4,189,553	-		Pf6N2E2_3599	0.84	-0.3
4,189,553	-		Pf6N2E2_3599	0.84	+0.5
4,189,697	+				+0.6
4,189,697	+				-0.4
4,189,698	-				-0.4
4,189,698	-				+0.5
4,189,698	-				-0.7
4,189,744	+				+0.4
4,189,744	+				+0.4
4,189,744	+				-0.7
4,189,744	+				+2.0
4,189,744	+				+1.3
4,189,745	-				-0.4
4,189,745	-				-0.5
4,189,745	-				+0.3
4,189,745	-				+0.5
4,189,789	+				-0.2
4,189,789	+				-0.3
4,189,790	-				+0.4
4,189,883	+				-2.0
4,190,223	-		Pf6N2E2_3600	0.11	+0.1
4,190,223	-		Pf6N2E2_3600	0.11	-0.3
4,190,223	-		Pf6N2E2_3600	0.11	+1.2
4,190,411	+		Pf6N2E2_3600	0.19	-1.0
4,190,411	+		Pf6N2E2_3600	0.19	-0.8
4,190,411	+		Pf6N2E2_3600	0.19	-0.0
4,190,411	+		Pf6N2E2_3600	0.19	-1.1
4,190,411	+		Pf6N2E2_3600	0.19	-0.4
4,190,411	+		Pf6N2E2_3600	0.19	-0.4
4,190,412	-		Pf6N2E2_3600	0.19	-2.1
4,190,412	-		Pf6N2E2_3600	0.19	-1.5
4,190,447	+		Pf6N2E2_3600	0.21	+0.3
4,190,447	+		Pf6N2E2_3600	0.21	-2.1
4,190,447	+		Pf6N2E2_3600	0.21	+0.6
4,190,447	+		Pf6N2E2_3600	0.21	-1.1
4,190,448	-		Pf6N2E2_3600	0.21	-0.3
4,190,448	-		Pf6N2E2_3600	0.21	-0.5
4,190,448	-		Pf6N2E2_3600	0.21	+0.3
4,190,594	+		Pf6N2E2_3600	0.27	+0.1
4,190,595	-		Pf6N2E2_3600	0.27	+0.2
4,190,621	+		Pf6N2E2_3600	0.28	-0.3
4,190,621	+		Pf6N2E2_3600	0.28	-1.3
4,190,621	+		Pf6N2E2_3600	0.28	+0.1
4,190,621	+		Pf6N2E2_3600	0.28	+0.1
4,190,622	-		Pf6N2E2_3600	0.28	-0.6
4,190,622	-		Pf6N2E2_3600	0.28	-0.7
4,190,622	-		Pf6N2E2_3600	0.28	-2.3
4,190,651	+		Pf6N2E2_3600	0.29	-0.5
4,190,651	+		Pf6N2E2_3600	0.29	+0.2
4,190,652	-		Pf6N2E2_3600	0.29	-0.6
4,190,652	-		Pf6N2E2_3600	0.29	+0.6
4,190,652	-		Pf6N2E2_3600	0.29	-0.0
4,190,652	-		Pf6N2E2_3600	0.29	+0.3
4,190,701	-		Pf6N2E2_3600	0.32	-1.4
4,190,759	+		Pf6N2E2_3600	0.34	-1.6
4,190,875	-		Pf6N2E2_3600	0.39	-1.3
4,190,875	-		Pf6N2E2_3600	0.39	-0.3
4,190,960	+		Pf6N2E2_3600	0.43	+0.8
4,191,210	-		Pf6N2E2_3600	0.54	+0.1
4,191,227	+		Pf6N2E2_3600	0.54	+0.5
4,191,227	+		Pf6N2E2_3600	0.54	+0.7
4,191,227	+		Pf6N2E2_3600	0.54	-2.3
4,191,228	-		Pf6N2E2_3600	0.54	-0.8
4,191,228	-		Pf6N2E2_3600	0.54	-1.1
4,191,228	-		Pf6N2E2_3600	0.54	-0.0
4,191,228	-		Pf6N2E2_3600	0.54	-2.8
4,191,228	-		Pf6N2E2_3600	0.54	-1.4
4,191,359	+		Pf6N2E2_3600	0.60	-0.6
4,191,359	+		Pf6N2E2_3600	0.60	+1.9
4,191,360	-		Pf6N2E2_3600	0.60	-0.9
4,191,530	+		Pf6N2E2_3600	0.68	+0.6
4,191,530	+		Pf6N2E2_3600	0.68	+0.6
4,191,530	+		Pf6N2E2_3600	0.68	+1.3
4,191,531	-		Pf6N2E2_3600	0.68	+0.9
4,191,590	+		Pf6N2E2_3600	0.70	+0.6
4,191,713	+		Pf6N2E2_3600	0.76	-1.7
4,191,773	+		Pf6N2E2_3600	0.78	-1.2
4,191,774	-		Pf6N2E2_3600	0.78	+0.6
4,191,779	+		Pf6N2E2_3600	0.78	+0.6
4,191,780	-		Pf6N2E2_3600	0.78	-1.4
4,191,839	+		Pf6N2E2_3600	0.81	+1.7
4,191,839	+		Pf6N2E2_3600	0.81	-1.2
4,191,839	+		Pf6N2E2_3600	0.81	+0.3
4,191,839	+		Pf6N2E2_3600	0.81	+0.3
4,191,840	-		Pf6N2E2_3600	0.81	-1.0
4,191,840	-		Pf6N2E2_3600	0.81	-1.3
4,191,840	-		Pf6N2E2_3600	0.81	-1.7
4,191,840	-		Pf6N2E2_3600	0.81	-0.2
4,191,862	-		Pf6N2E2_3600	0.82	-0.3
4,191,862	-		Pf6N2E2_3600	0.82	+0.8
4,191,863	+		Pf6N2E2_3600	0.82	+0.7
4,191,863	+		Pf6N2E2_3600	0.82	+0.2
4,191,863	+		Pf6N2E2_3600	0.82	+0.2
4,191,864	-		Pf6N2E2_3600	0.82	+0.1
4,191,914	+		Pf6N2E2_3600	0.84	+0.9
4,191,950	+		Pf6N2E2_3600	0.86	-0.5
4,192,130	+				-0.4
4,192,130	+				-1.2
4,192,131	-				-1.2
4,192,131	-				+0.4
4,192,238	+				-0.3
4,192,238	+				-0.8
4,192,238	+				-0.5
4,192,247	+				+1.1
4,192,290	+				-2.0
4,192,290	+				-1.0
4,192,291	-				+0.7
4,192,318	+				-1.4
4,192,320	+				-1.4
4,192,321	-				-0.6
4,192,321	-				-0.0
4,192,321	-				-2.1
4,192,321	-				-0.6
4,192,321	-				+0.5
4,192,321	-				-0.1
4,192,321	-				-1.7
4,192,397	+				-0.4
4,192,397	+				+0.3
4,192,398	-				+0.7
4,192,468	+				+0.2
4,192,469	-				-0.9
4,192,548	-				+0.1
4,192,568	+				-0.8
4,192,569	-				+0.6
4,192,589	+				-2.6
4,192,589	+				+0.1
4,192,589	+				+0.5
4,192,589	+				+0.6
4,192,590	-				-1.9
4,192,590	-				+0.6