Experiment: Carbon source D-Glucose 20 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS23090 and HSERO_RS23095 are separated by 398 nucleotides HSERO_RS23095 and HSERO_RS23100 are separated by 6 nucleotides HSERO_RS23100 and HSERO_RS23105 overlap by 4 nucleotides
HSERO_RS23090: HSERO_RS23090 - acriflavin resistance protein, at 5,300,573 to 5,303,764
_RS23090
HSERO_RS23095: HSERO_RS23095 - histidine kinase, at 5,304,163 to 5,305,041
_RS23095
HSERO_RS23100: HSERO_RS23100 - hypothetical protein, at 5,305,048 to 5,305,944
_RS23100
HSERO_RS23105: HSERO_RS23105 - hypothetical protein, at 5,305,941 to 5,306,870
_RS23105
Position (kb) 5304
5305
5306 Strain fitness (log2 ratio) -1
0
1
2
3 at 5303.185 kb on + strand, within HSERO_RS23090 at 5303.214 kb on + strand, within HSERO_RS23090 at 5303.230 kb on + strand, within HSERO_RS23090 at 5303.696 kb on - strand at 5303.871 kb on + strand at 5303.874 kb on - strand at 5303.879 kb on - strand at 5303.879 kb on - strand at 5303.879 kb on - strand at 5303.942 kb on - strand at 5304.013 kb on - strand at 5304.137 kb on + strand at 5304.251 kb on + strand, within HSERO_RS23095 at 5304.259 kb on - strand, within HSERO_RS23095 at 5304.371 kb on + strand, within HSERO_RS23095 at 5304.440 kb on - strand, within HSERO_RS23095 at 5304.804 kb on + strand, within HSERO_RS23095 at 5304.980 kb on - strand at 5305.036 kb on + strand at 5305.044 kb on - strand at 5305.067 kb on - strand at 5305.413 kb on + strand, within HSERO_RS23100 at 5305.558 kb on - strand, within HSERO_RS23100 at 5305.630 kb on - strand, within HSERO_RS23100 at 5305.647 kb on + strand, within HSERO_RS23100 at 5305.851 kb on + strand, within HSERO_RS23100 at 5305.888 kb on + strand at 5305.924 kb on + strand at 5305.929 kb on + strand at 5305.932 kb on - strand at 5305.952 kb on + strand at 5306.034 kb on + strand, within HSERO_RS23105 at 5306.034 kb on + strand, within HSERO_RS23105 at 5306.034 kb on + strand, within HSERO_RS23105
Per-strain Table
Position Strand Gene LocusTag Fraction Carbon source D-Glucose 20 mM remove 5,303,185 + HSERO_RS23090 0.82 -0.1 5,303,214 + HSERO_RS23090 0.83 -0.7 5,303,230 + HSERO_RS23090 0.83 +0.4 5,303,696 - +0.4 5,303,871 + -0.6 5,303,874 - +0.5 5,303,879 - -0.4 5,303,879 - -0.0 5,303,879 - +0.1 5,303,942 - +0.1 5,304,013 - -0.2 5,304,137 + +0.3 5,304,251 + HSERO_RS23095 0.10 -0.3 5,304,259 - HSERO_RS23095 0.11 +0.4 5,304,371 + HSERO_RS23095 0.24 +2.9 5,304,440 - HSERO_RS23095 0.32 +0.6 5,304,804 + HSERO_RS23095 0.73 +0.1 5,304,980 - +0.2 5,305,036 + -0.3 5,305,044 - -0.2 5,305,067 - +0.0 5,305,413 + HSERO_RS23100 0.41 +0.3 5,305,558 - HSERO_RS23100 0.57 +1.0 5,305,630 - HSERO_RS23100 0.65 +1.2 5,305,647 + HSERO_RS23100 0.67 +0.1 5,305,851 + HSERO_RS23100 0.90 -0.1 5,305,888 + -0.5 5,305,924 + +0.3 5,305,929 + -0.2 5,305,932 - +1.6 5,305,952 + -0.4 5,306,034 + HSERO_RS23105 0.10 -0.4 5,306,034 + HSERO_RS23105 0.10 +1.3 5,306,034 + HSERO_RS23105 0.10 +0.2
Or see this region's nucleotide sequence