Experiment: Carbon source D-Glucose 20 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS22995 and HSERO_RS23000 are separated by 1 nucleotides HSERO_RS23000 and HSERO_RS23005 are separated by 496 nucleotides HSERO_RS23005 and HSERO_RS23010 are separated by 105 nucleotides
HSERO_RS22995: HSERO_RS22995 - antitoxin, at 5,276,551 to 5,276,946
_RS22995
HSERO_RS23000: HSERO_RS23000 - hypothetical protein, at 5,276,948 to 5,277,244
_RS23000
HSERO_RS23005: HSERO_RS23005 - glutathione S-transferase, at 5,277,741 to 5,278,358
_RS23005
HSERO_RS23010: HSERO_RS23010 - D-galacturonate transporter ExuT <small>(from data)</small>, at 5,278,464 to 5,279,690
_RS23010
Position (kb) 5277
5278
5279 Strain fitness (log2 ratio) -1
0
1
2 at 5276.832 kb on + strand, within HSERO_RS22995 at 5276.947 kb on - strand at 5277.341 kb on - strand at 5277.426 kb on + strand at 5277.434 kb on - strand at 5277.434 kb on - strand at 5277.681 kb on + strand at 5277.968 kb on + strand, within HSERO_RS23005 at 5277.978 kb on + strand, within HSERO_RS23005 at 5278.048 kb on + strand, within HSERO_RS23005 at 5278.061 kb on - strand at 5278.099 kb on - strand, within HSERO_RS23005 at 5278.164 kb on + strand, within HSERO_RS23005 at 5278.325 kb on + strand at 5278.328 kb on - strand at 5278.328 kb on - strand at 5278.670 kb on + strand, within HSERO_RS23010 at 5278.678 kb on - strand, within HSERO_RS23010 at 5278.695 kb on + strand, within HSERO_RS23010 at 5278.748 kb on + strand, within HSERO_RS23010 at 5278.807 kb on + strand, within HSERO_RS23010 at 5278.830 kb on + strand, within HSERO_RS23010 at 5278.848 kb on - strand, within HSERO_RS23010 at 5278.852 kb on + strand, within HSERO_RS23010 at 5278.963 kb on + strand, within HSERO_RS23010 at 5279.137 kb on - strand, within HSERO_RS23010 at 5279.172 kb on - strand, within HSERO_RS23010 at 5279.178 kb on + strand, within HSERO_RS23010 at 5279.299 kb on + strand, within HSERO_RS23010
Per-strain Table
Position Strand Gene LocusTag Fraction Carbon source D-Glucose 20 mM remove 5,276,832 + HSERO_RS22995 0.71 -0.3 5,276,947 - -0.1 5,277,341 - +1.0 5,277,426 + +0.2 5,277,434 - +0.1 5,277,434 - +0.0 5,277,681 + +0.0 5,277,968 + HSERO_RS23005 0.37 +1.1 5,277,978 + HSERO_RS23005 0.38 -0.0 5,278,048 + HSERO_RS23005 0.50 +0.9 5,278,061 - +0.3 5,278,099 - HSERO_RS23005 0.58 +0.0 5,278,164 + HSERO_RS23005 0.68 +2.3 5,278,325 + -0.0 5,278,328 - +0.2 5,278,328 - +0.0 5,278,670 + HSERO_RS23010 0.17 -0.0 5,278,678 - HSERO_RS23010 0.17 +0.9 5,278,695 + HSERO_RS23010 0.19 -0.3 5,278,748 + HSERO_RS23010 0.23 -0.2 5,278,807 + HSERO_RS23010 0.28 +2.7 5,278,830 + HSERO_RS23010 0.30 +0.3 5,278,848 - HSERO_RS23010 0.31 +0.3 5,278,852 + HSERO_RS23010 0.32 -0.7 5,278,963 + HSERO_RS23010 0.41 +0.4 5,279,137 - HSERO_RS23010 0.55 +0.9 5,279,172 - HSERO_RS23010 0.58 +0.4 5,279,178 + HSERO_RS23010 0.58 +0.7 5,279,299 + HSERO_RS23010 0.68 -0.4
Or see this region's nucleotide sequence