Experiment: Carbon source D-Glucose 20 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS22310 and HSERO_RS22315 are separated by 193 nucleotides HSERO_RS22315 and HSERO_RS22320 are separated by 28 nucleotides
HSERO_RS22310: HSERO_RS22310 - LysR family transcriptional regulator, at 5,101,259 to 5,102,158
_RS22310
HSERO_RS22315: HSERO_RS22315 - hypothetical protein, at 5,102,352 to 5,103,296
_RS22315
HSERO_RS22320: HSERO_RS22320 - hypothetical protein, at 5,103,325 to 5,106,597
_RS22320
Position (kb) 5102
5103
5104 Strain fitness (log2 ratio) -1
0
1 at 5101.512 kb on - strand, within HSERO_RS22310 at 5101.758 kb on - strand, within HSERO_RS22310 at 5101.917 kb on + strand, within HSERO_RS22310 at 5102.096 kb on + strand at 5102.324 kb on + strand at 5102.381 kb on + strand at 5102.560 kb on - strand, within HSERO_RS22315 at 5102.614 kb on - strand, within HSERO_RS22315 at 5102.614 kb on - strand, within HSERO_RS22315 at 5102.768 kb on + strand, within HSERO_RS22315 at 5103.119 kb on + strand, within HSERO_RS22315 at 5103.250 kb on - strand at 5103.250 kb on - strand at 5103.250 kb on - strand at 5103.250 kb on - strand at 5103.250 kb on - strand at 5103.323 kb on + strand at 5103.331 kb on - strand at 5103.434 kb on + strand at 5103.438 kb on + strand at 5103.513 kb on + strand at 5103.569 kb on + strand at 5103.603 kb on + strand at 5103.706 kb on + strand, within HSERO_RS22320 at 5103.711 kb on + strand, within HSERO_RS22320 at 5103.721 kb on + strand, within HSERO_RS22320 at 5103.726 kb on + strand, within HSERO_RS22320 at 5103.879 kb on - strand, within HSERO_RS22320 at 5104.031 kb on - strand, within HSERO_RS22320
Per-strain Table
Position Strand Gene LocusTag Fraction Carbon source D-Glucose 20 mM remove 5,101,512 - HSERO_RS22310 0.28 -0.4 5,101,758 - HSERO_RS22310 0.55 +0.1 5,101,917 + HSERO_RS22310 0.73 +0.6 5,102,096 + +0.3 5,102,324 + -0.2 5,102,381 + -0.0 5,102,560 - HSERO_RS22315 0.22 -0.7 5,102,614 - HSERO_RS22315 0.28 +0.1 5,102,614 - HSERO_RS22315 0.28 +0.4 5,102,768 + HSERO_RS22315 0.44 +1.0 5,103,119 + HSERO_RS22315 0.81 +0.8 5,103,250 - +0.9 5,103,250 - +0.9 5,103,250 - -0.2 5,103,250 - +0.3 5,103,250 - -0.1 5,103,323 + +0.0 5,103,331 - +0.2 5,103,434 + +0.6 5,103,438 + +0.7 5,103,513 + +0.9 5,103,569 + +0.0 5,103,603 + +0.3 5,103,706 + HSERO_RS22320 0.12 -0.4 5,103,711 + HSERO_RS22320 0.12 +0.2 5,103,721 + HSERO_RS22320 0.12 +0.1 5,103,726 + HSERO_RS22320 0.12 -0.1 5,103,879 - HSERO_RS22320 0.17 -0.9 5,104,031 - HSERO_RS22320 0.22 +0.2
Or see this region's nucleotide sequence