Experiment: Carbon source D-Glucose 20 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS21465 and HSERO_RS21470 are separated by 210 nucleotides HSERO_RS21470 and HSERO_RS21475 are separated by 52 nucleotides HSERO_RS21475 and HSERO_RS21480 are separated by 98 nucleotides HSERO_RS21480 and HSERO_RS21485 are separated by 13 nucleotides
HSERO_RS21465: HSERO_RS21465 - porin, at 4,914,412 to 4,915,575
_RS21465
HSERO_RS21470: HSERO_RS21470 - hypothetical protein, at 4,915,786 to 4,916,454
_RS21470
HSERO_RS21475: HSERO_RS21475 - recombinase XerC, at 4,916,507 to 4,917,487
_RS21475
HSERO_RS21480: HSERO_RS21480 - transcriptional regulator, at 4,917,586 to 4,918,167
_RS21480
HSERO_RS21485: HSERO_RS21485 - phosphoglycolate phosphatase, at 4,918,181 to 4,918,918
_RS21485
Position (kb) 4916
4917
4918 Strain fitness (log2 ratio) -1
0
1 at 4915.810 kb on - strand at 4915.981 kb on - strand, within HSERO_RS21470 at 4916.365 kb on - strand, within HSERO_RS21470 at 4916.431 kb on + strand at 4916.982 kb on + strand, within HSERO_RS21475 at 4917.051 kb on + strand, within HSERO_RS21475 at 4917.162 kb on + strand, within HSERO_RS21475 at 4917.484 kb on + strand at 4917.521 kb on - strand at 4917.528 kb on + strand at 4917.550 kb on + strand at 4917.550 kb on + strand at 4917.558 kb on - strand at 4917.558 kb on - strand at 4917.587 kb on - strand at 4917.793 kb on + strand, within HSERO_RS21480 at 4918.093 kb on + strand, within HSERO_RS21480 at 4918.185 kb on - strand at 4918.230 kb on + strand at 4918.318 kb on + strand, within HSERO_RS21485 at 4918.362 kb on + strand, within HSERO_RS21485
Per-strain Table
Position Strand Gene LocusTag Fraction Carbon source D-Glucose 20 mM remove 4,915,810 - +0.6 4,915,981 - HSERO_RS21470 0.29 +0.3 4,916,365 - HSERO_RS21470 0.87 +0.7 4,916,431 + -0.2 4,916,982 + HSERO_RS21475 0.48 -0.4 4,917,051 + HSERO_RS21475 0.55 +0.9 4,917,162 + HSERO_RS21475 0.67 +1.1 4,917,484 + -0.7 4,917,521 - -0.1 4,917,528 + +0.4 4,917,550 + -0.2 4,917,550 + -0.2 4,917,558 - -0.8 4,917,558 - +0.3 4,917,587 - +0.1 4,917,793 + HSERO_RS21480 0.36 -0.4 4,918,093 + HSERO_RS21480 0.87 -0.6 4,918,185 - -0.7 4,918,230 + -0.4 4,918,318 + HSERO_RS21485 0.19 -0.6 4,918,362 + HSERO_RS21485 0.25 -0.5
Or see this region's nucleotide sequence