Experiment: Carbon source D-Glucose 20 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS15570 and HSERO_RS15575 are separated by 37 nucleotides HSERO_RS15575 and HSERO_RS15580 are separated by 7 nucleotides HSERO_RS15580 and HSERO_RS15585 are separated by 78 nucleotides HSERO_RS15585 and HSERO_RS15590 are separated by 30 nucleotides
HSERO_RS15570: HSERO_RS15570 - sulfate adenylyltransferase, at 3,558,091 to 3,559,422
_RS15570
HSERO_RS15575: HSERO_RS15575 - uroporphyrin-III C-methyltransferase, at 3,559,460 to 3,560,221
_RS15575
HSERO_RS15580: HSERO_RS15580 - tRNA-binding protein, at 3,560,229 to 3,560,600
_RS15580
HSERO_RS15585: HSERO_RS15585 - cobalamin biosynthesis protein CbiX, at 3,560,679 to 3,561,044
_RS15585
HSERO_RS15590: HSERO_RS15590 - permease, at 3,561,075 to 3,562,205
_RS15590
Position (kb) 3560
3561 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 3559.236 kb on - strand, within HSERO_RS15570 at 3559.288 kb on + strand, within HSERO_RS15570 at 3559.464 kb on - strand at 3559.581 kb on + strand, within HSERO_RS15575 at 3560.235 kb on - strand at 3560.325 kb on + strand, within HSERO_RS15580 at 3560.555 kb on + strand, within HSERO_RS15580 at 3560.560 kb on + strand, within HSERO_RS15580 at 3560.560 kb on + strand, within HSERO_RS15580 at 3560.560 kb on + strand, within HSERO_RS15580 at 3560.582 kb on - strand at 3560.733 kb on - strand, within HSERO_RS15585 at 3560.831 kb on + strand, within HSERO_RS15585 at 3560.941 kb on - strand, within HSERO_RS15585 at 3560.949 kb on + strand, within HSERO_RS15585 at 3560.951 kb on - strand, within HSERO_RS15585 at 3560.957 kb on - strand, within HSERO_RS15585 at 3560.957 kb on - strand, within HSERO_RS15585 at 3560.964 kb on + strand, within HSERO_RS15585 at 3560.972 kb on - strand, within HSERO_RS15585 at 3561.003 kb on - strand, within HSERO_RS15585
Per-strain Table
Position Strand Gene LocusTag Fraction Carbon source D-Glucose 20 mM remove 3,559,236 - HSERO_RS15570 0.86 -2.8 3,559,288 + HSERO_RS15570 0.90 -4.0 3,559,464 - -1.4 3,559,581 + HSERO_RS15575 0.16 -3.8 3,560,235 - -0.9 3,560,325 + HSERO_RS15580 0.26 +0.6 3,560,555 + HSERO_RS15580 0.88 +0.2 3,560,560 + HSERO_RS15580 0.89 +0.6 3,560,560 + HSERO_RS15580 0.89 +0.2 3,560,560 + HSERO_RS15580 0.89 +2.0 3,560,582 - -0.1 3,560,733 - HSERO_RS15585 0.15 -1.4 3,560,831 + HSERO_RS15585 0.42 -2.1 3,560,941 - HSERO_RS15585 0.72 -0.0 3,560,949 + HSERO_RS15585 0.74 -2.0 3,560,951 - HSERO_RS15585 0.74 -2.4 3,560,957 - HSERO_RS15585 0.76 -3.2 3,560,957 - HSERO_RS15585 0.76 -2.1 3,560,964 + HSERO_RS15585 0.78 -1.9 3,560,972 - HSERO_RS15585 0.80 -3.0 3,561,003 - HSERO_RS15585 0.89 -1.7
Or see this region's nucleotide sequence