Experiment: Carbon source D-Glucose 20 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS07460 and HSERO_RS07465 are separated by 33 nucleotides HSERO_RS07465 and HSERO_RS07470 are separated by 45 nucleotides HSERO_RS07470 and HSERO_RS07475 are separated by 116 nucleotides HSERO_RS07475 and HSERO_RS07480 overlap by 4 nucleotides
HSERO_RS07460: HSERO_RS07460 - hypothetical protein, at 1,707,810 to 1,708,133
_RS07460
HSERO_RS07465: HSERO_RS07465 - alpha/beta hydrolase, at 1,708,167 to 1,708,979
_RS07465
HSERO_RS07470: HSERO_RS07470 - ketosteroid isomerase, at 1,709,025 to 1,709,588
_RS07470
HSERO_RS07475: HSERO_RS07475 - nitrate ABC transporter permease, at 1,709,705 to 1,710,523
_RS07475
HSERO_RS07480: HSERO_RS07480 - nitrate ABC transporter ATP-binding protein, at 1,710,520 to 1,711,317
_RS07480
Position (kb) 1709
1710 Strain fitness (log2 ratio) -1
0
1 at 1708.196 kb on - strand at 1708.196 kb on - strand at 1708.366 kb on - strand, within HSERO_RS07465 at 1708.426 kb on - strand, within HSERO_RS07465 at 1708.496 kb on + strand, within HSERO_RS07465 at 1708.896 kb on + strand, within HSERO_RS07465 at 1708.901 kb on + strand at 1708.989 kb on - strand at 1709.431 kb on - strand, within HSERO_RS07470 at 1709.704 kb on + strand at 1709.769 kb on + strand at 1709.806 kb on - strand, within HSERO_RS07475 at 1709.837 kb on - strand, within HSERO_RS07475 at 1709.856 kb on - strand, within HSERO_RS07475 at 1709.948 kb on - strand, within HSERO_RS07475 at 1709.968 kb on - strand, within HSERO_RS07475 at 1710.069 kb on + strand, within HSERO_RS07475 at 1710.082 kb on + strand, within HSERO_RS07475 at 1710.087 kb on + strand, within HSERO_RS07475 at 1710.338 kb on - strand, within HSERO_RS07475 at 1710.576 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Carbon source D-Glucose 20 mM remove 1,708,196 - +0.1 1,708,196 - +0.3 1,708,366 - HSERO_RS07465 0.24 -0.1 1,708,426 - HSERO_RS07465 0.32 -0.2 1,708,496 + HSERO_RS07465 0.40 -0.3 1,708,896 + HSERO_RS07465 0.90 +0.1 1,708,901 + +0.3 1,708,989 - +0.2 1,709,431 - HSERO_RS07470 0.72 +0.8 1,709,704 + +0.1 1,709,769 + +0.4 1,709,806 - HSERO_RS07475 0.12 +0.1 1,709,837 - HSERO_RS07475 0.16 +0.4 1,709,856 - HSERO_RS07475 0.18 +0.2 1,709,948 - HSERO_RS07475 0.30 +0.1 1,709,968 - HSERO_RS07475 0.32 +0.2 1,710,069 + HSERO_RS07475 0.44 +0.8 1,710,082 + HSERO_RS07475 0.46 -0.0 1,710,087 + HSERO_RS07475 0.47 +0.3 1,710,338 - HSERO_RS07475 0.77 -0.2 1,710,576 - -0.0
Or see this region's nucleotide sequence