Experiment: Carbon source D-Glucose 20 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS01585 and HSERO_RS01590 are separated by 120 nucleotides HSERO_RS01590 and HSERO_RS01595 are separated by 354 nucleotides HSERO_RS01595 and HSERO_RS01600 are separated by 181 nucleotides
HSERO_RS01585: HSERO_RS01585 - NADP-dependent oxidoreductase, at 352,320 to 353,327
_RS01585
HSERO_RS01590: HSERO_RS01590 - antibiotic biosynthesis monooxygenase, at 353,448 to 353,792
_RS01590
HSERO_RS01595: HSERO_RS01595 - MarR family transcriptional regulator, at 354,147 to 354,602
_RS01595
HSERO_RS01600: HSERO_RS01600 - 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase, at 354,784 to 355,536
_RS01600
Position (kb) 353
354 Strain fitness (log2 ratio) -1
0
1 at 352.472 kb on + strand, within HSERO_RS01585 at 352.472 kb on + strand at 352.577 kb on + strand, within HSERO_RS01585 at 352.603 kb on + strand, within HSERO_RS01585 at 352.719 kb on - strand, within HSERO_RS01585 at 352.915 kb on + strand, within HSERO_RS01585 at 353.001 kb on + strand, within HSERO_RS01585 at 353.003 kb on + strand, within HSERO_RS01585 at 353.075 kb on + strand, within HSERO_RS01585 at 353.100 kb on - strand, within HSERO_RS01585 at 353.129 kb on + strand, within HSERO_RS01585 at 353.182 kb on - strand, within HSERO_RS01585 at 353.474 kb on + strand at 353.535 kb on + strand, within HSERO_RS01590 at 353.603 kb on - strand, within HSERO_RS01590 at 353.685 kb on - strand, within HSERO_RS01590 at 353.754 kb on - strand, within HSERO_RS01590 at 353.790 kb on + strand at 353.790 kb on + strand at 353.800 kb on + strand at 353.846 kb on - strand at 353.867 kb on + strand at 353.867 kb on + strand at 353.867 kb on + strand at 353.867 kb on + strand at 353.867 kb on + strand at 353.875 kb on - strand at 353.875 kb on - strand at 353.921 kb on + strand at 353.940 kb on + strand at 354.032 kb on + strand at 354.124 kb on - strand at 354.126 kb on + strand at 354.500 kb on - strand, within HSERO_RS01595 at 354.500 kb on - strand, within HSERO_RS01595 at 354.600 kb on - strand at 354.755 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Carbon source D-Glucose 20 mM remove 352,472 + HSERO_RS01585 0.15 -0.0 352,472 + +0.9 352,577 + HSERO_RS01585 0.25 +0.1 352,603 + HSERO_RS01585 0.28 -0.3 352,719 - HSERO_RS01585 0.40 -1.1 352,915 + HSERO_RS01585 0.59 -0.6 353,001 + HSERO_RS01585 0.68 +0.3 353,003 + HSERO_RS01585 0.68 -0.8 353,075 + HSERO_RS01585 0.75 +0.8 353,100 - HSERO_RS01585 0.77 +0.1 353,129 + HSERO_RS01585 0.80 -0.3 353,182 - HSERO_RS01585 0.86 +0.1 353,474 + +0.9 353,535 + HSERO_RS01590 0.25 +0.7 353,603 - HSERO_RS01590 0.45 +0.5 353,685 - HSERO_RS01590 0.69 -0.2 353,754 - HSERO_RS01590 0.89 +0.5 353,790 + -1.1 353,790 + -0.1 353,800 + +0.5 353,846 - -0.0 353,867 + -0.3 353,867 + -0.4 353,867 + -1.2 353,867 + +0.1 353,867 + -0.2 353,875 - -0.2 353,875 - -0.2 353,921 + -0.5 353,940 + -0.5 354,032 + -0.4 354,124 - +0.3 354,126 + -0.3 354,500 - HSERO_RS01595 0.77 -0.2 354,500 - HSERO_RS01595 0.77 -0.6 354,600 - -0.7 354,755 + +0.1
Or see this region's nucleotide sequence