Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS08705

Experiment: Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB
1,849,156	+		ABZR87_RS08700	0.25	-1.2
1,849,156	+		ABZR87_RS08700	0.25	-1.6
1,849,157	-		ABZR87_RS08700	0.25	-1.1
1,849,157	-		ABZR87_RS08700	0.25	+0.4
1,849,169	+		ABZR87_RS08700	0.26	-0.2
1,849,169	+		ABZR87_RS08700	0.26	+2.0
1,849,169	+		ABZR87_RS08700	0.26	+0.6
1,849,169	+		ABZR87_RS08700	0.26	+0.1
1,849,170	-		ABZR87_RS08700	0.26	-0.5
1,849,170	-		ABZR87_RS08700	0.26	-0.6
1,849,170	-		ABZR87_RS08700	0.26	-1.0
1,849,172	+		ABZR87_RS08700	0.26	+0.6
1,849,172	+		ABZR87_RS08700	0.26	-0.5
1,849,172	+		ABZR87_RS08700	0.26	-2.1
1,849,172	+		ABZR87_RS08700	0.26	-1.0
1,849,173	-		ABZR87_RS08700	0.26	-0.9
1,849,173	-		ABZR87_RS08700	0.26	+0.6
1,849,173	-		ABZR87_RS08700	0.26	-1.3
1,849,173	-		ABZR87_RS08700	0.26	-1.0
1,849,173	-		ABZR87_RS08700	0.26	+0.4
1,849,173	-		ABZR87_RS08700	0.26	-0.7
1,849,187	+		ABZR87_RS08700	0.27	-2.9
1,849,188	-		ABZR87_RS08700	0.28	-0.6
1,849,188	-		ABZR87_RS08700	0.28	-0.0
1,849,223	+		ABZR87_RS08700	0.31	-1.0
1,849,314	+		ABZR87_RS08700	0.39	-0.6
1,849,314	+		ABZR87_RS08700	0.39	-0.6
1,849,314	+		ABZR87_RS08700	0.39	-0.0
1,849,314	+		ABZR87_RS08700	0.39	-1.2
1,849,315	-		ABZR87_RS08700	0.39	+0.6
1,849,315	-		ABZR87_RS08700	0.39	+0.4
1,849,315	-		ABZR87_RS08700	0.39	+2.0
1,849,316	+		ABZR87_RS08700	0.39	-0.5
1,849,316	+		ABZR87_RS08700	0.39	+2.0
1,849,316	+		ABZR87_RS08700	0.39	-0.4
1,849,317	-		ABZR87_RS08700	0.39	-0.9
1,849,317	-		ABZR87_RS08700	0.39	-0.2
1,849,335	+		ABZR87_RS08700	0.41	+1.4
1,849,335	+		ABZR87_RS08700	0.41	+2.0
1,849,336	-		ABZR87_RS08700	0.41	-0.0
1,849,410	+		ABZR87_RS08700	0.47	-0.0
1,849,410	+		ABZR87_RS08700	0.47	+2.0
1,849,411	-		ABZR87_RS08700	0.47	-1.4
1,849,411	-		ABZR87_RS08700	0.47	+0.1
1,849,411	-		ABZR87_RS08700	0.47	+0.4
1,849,411	-		ABZR87_RS08700	0.47	-0.7
1,849,411	-		ABZR87_RS08700	0.47	+3.0
1,849,544	+		ABZR87_RS08700	0.59	-0.2
1,849,545	-		ABZR87_RS08700	0.59	-0.4
1,849,545	-		ABZR87_RS08700	0.59	+1.0
1,849,545	-		ABZR87_RS08700	0.59	+0.4
1,849,547	+		ABZR87_RS08700	0.59	-2.1
1,849,547	+		ABZR87_RS08700	0.59	+0.1
1,849,547	+		ABZR87_RS08700	0.59	-0.4
1,849,547	+		ABZR87_RS08700	0.59	+1.0
1,849,547	+		ABZR87_RS08700	0.59	-0.2
1,849,548	-		ABZR87_RS08700	0.59	-0.3
1,849,548	-		ABZR87_RS08700	0.59	+0.4
1,849,563	+		ABZR87_RS08700	0.61	-0.7
1,849,564	-		ABZR87_RS08700	0.61	-0.6
1,849,564	-		ABZR87_RS08700	0.61	+1.0
1,849,671	-		ABZR87_RS08700	0.70	-1.1
1,849,677	+		ABZR87_RS08700	0.71	+0.6
1,849,678	-		ABZR87_RS08700	0.71	-0.0
1,849,678	-		ABZR87_RS08700	0.71	-0.5
1,849,711	+		ABZR87_RS08700	0.74	+1.0
1,849,712	-		ABZR87_RS08700	0.74	+0.4
1,849,816	+		ABZR87_RS08700	0.83	-0.4
1,849,816	+		ABZR87_RS08700	0.83	+0.1
1,849,817	-		ABZR87_RS08700	0.83	+1.4
1,849,817	-		ABZR87_RS08700	0.83	-0.9
1,849,848	-		ABZR87_RS08700	0.86	-0.9
1,849,858	+		ABZR87_RS08700	0.87	-0.2
1,849,918	-				-1.2
1,849,918	-				-0.5
1,849,918	-				-3.3
1,849,952	+				-0.2
1,849,952	+				-2.4
1,849,953	-				+0.4
1,849,953	-				-0.2
1,849,953	-				-1.6
1,849,953	-				-0.2
1,849,961	+				+0.1
1,849,961	+				+1.2
1,849,961	+				+0.6
1,849,961	+				-2.6
1,849,961	+				+1.0
1,849,961	+				+0.6
1,849,962	-				+3.0
1,849,962	-				-0.4
1,849,962	-				-0.2
1,849,962	-				-0.5
1,849,962	-				-1.0
1,849,962	-				-1.0
1,849,962	-				+1.4
1,849,962	-				-1.2
1,849,962	-				-1.0
1,849,962	-				-1.0
1,849,965	+				-1.0
1,849,965	+				+2.0
1,849,965	+				+1.4
1,849,965	+				+0.1
1,849,965	+				+0.4
1,849,965	+				+3.0
1,849,966	-				+0.4
1,849,966	-				-0.2
1,849,966	-				+0.1
1,849,966	-				-0.9
1,849,966	-				+1.0
1,849,966	-				-1.2
1,849,966	-				+0.9
1,849,966	-				-0.2
1,849,966	-				-0.4
1,849,966	-				-2.4
1,849,966	-				-0.6
1,849,967	+				-0.5
1,849,968	-				+0.4
1,849,968	-				+0.6
1,849,974	+				-0.5
1,849,974	+				-1.0
1,849,978	+				+1.4
1,850,017	+				-0.7
1,850,017	+				-2.3
1,850,017	+				+0.4
1,850,017	+				-0.6
1,850,017	+				-0.4
1,850,017	+				+1.0
1,850,017	+				+1.7
1,850,017	+				-0.6
1,850,017	+				-2.7
1,850,017	+				-1.5
1,850,017	+				+2.2
1,850,018	-				-0.9
1,850,018	-				-0.5
1,850,018	-				+0.7
1,850,018	-				-0.7
1,850,018	-				-1.3
1,850,018	-				+1.7
1,850,018	-				-1.4
1,850,018	-				-0.8
1,850,023	+				-1.5
1,850,023	+				-1.2
1,850,023	+				+0.1
1,850,023	+				-1.4
1,850,024	-				+1.0
1,850,024	-				-1.4
1,850,024	-				-0.2
1,850,024	-				-0.7
1,850,024	-				-0.3
1,850,024	-				-1.1
1,850,024	-				-0.6
1,850,024	-				-1.6
1,850,024	-				-0.2
1,850,024	-				-2.9
1,850,136	+		ABZR87_RS08705	0.10	+0.0
1,850,137	-		ABZR87_RS08705	0.10	+1.0
1,850,137	-		ABZR87_RS08705	0.10	-0.9
1,850,148	-		ABZR87_RS08705	0.11	-0.9
1,850,203	+		ABZR87_RS08705	0.16	-1.3
1,850,203	+		ABZR87_RS08705	0.16	-1.2
1,850,204	-		ABZR87_RS08705	0.16	+0.9
1,850,204	-		ABZR87_RS08705	0.16	-1.0
1,850,204	-		ABZR87_RS08705	0.16	-3.8
1,850,204	-		ABZR87_RS08705	0.16	-0.7
1,850,204	-		ABZR87_RS08705	0.16	-1.2
1,850,204	-		ABZR87_RS08705	0.16	-0.5
1,850,204	-		ABZR87_RS08705	0.16	-0.7
1,850,226	+		ABZR87_RS08705	0.18	-2.4
1,850,226	+		ABZR87_RS08705	0.18	+0.4
1,850,227	-		ABZR87_RS08705	0.18	+0.1
1,850,230	-		ABZR87_RS08705	0.18	+0.6
1,850,263	+		ABZR87_RS08705	0.21	-1.6
1,850,264	-		ABZR87_RS08705	0.21	-1.5
1,850,264	-		ABZR87_RS08705	0.21	+3.0
1,850,268	+		ABZR87_RS08705	0.21	+0.4
1,850,268	+		ABZR87_RS08705	0.21	+1.4
1,850,268	+		ABZR87_RS08705	0.21	-0.9
1,850,269	-		ABZR87_RS08705	0.21	-0.2
1,850,269	-		ABZR87_RS08705	0.21	+0.2
1,850,269	-		ABZR87_RS08705	0.21	-2.2
1,850,269	-		ABZR87_RS08705	0.21	-1.4
1,850,269	-		ABZR87_RS08705	0.21	-0.4
1,850,293	+		ABZR87_RS08705	0.23	-1.5
1,850,293	+		ABZR87_RS08705	0.23	+1.4
1,850,294	-		ABZR87_RS08705	0.23	-0.1
1,850,334	+		ABZR87_RS08705	0.26	-2.4
1,850,335	-		ABZR87_RS08705	0.26	+0.4
1,850,335	-		ABZR87_RS08705	0.26	-1.1
1,850,335	-		ABZR87_RS08705	0.26	-1.1
1,850,340	+		ABZR87_RS08705	0.27	-1.3
1,850,340	+		ABZR87_RS08705	0.27	-0.4
1,850,341	-		ABZR87_RS08705	0.27	-2.7
1,850,341	-		ABZR87_RS08705	0.27	-0.4
1,850,359	+		ABZR87_RS08705	0.28	-1.4
1,850,359	+		ABZR87_RS08705	0.28	+0.2
1,850,359	+		ABZR87_RS08705	0.28	-1.1
1,850,360	-		ABZR87_RS08705	0.28	-2.2
1,850,360	-		ABZR87_RS08705	0.28	-0.6
1,850,379	-		ABZR87_RS08705	0.30	-0.8
1,850,379	-		ABZR87_RS08705	0.30	+0.4
1,850,379	-		ABZR87_RS08705	0.30	+0.3
1,850,409	+		ABZR87_RS08705	0.32	-1.0
1,850,409	+		ABZR87_RS08705	0.32	-1.0
1,850,409	+		ABZR87_RS08705	0.32	+0.3
1,850,409	+		ABZR87_RS08705	0.32	-1.0
1,850,409	+		ABZR87_RS08705	0.32	-2.7
1,850,410	-		ABZR87_RS08705	0.32	-0.4
1,850,423	+		ABZR87_RS08705	0.33	+0.0
1,850,423	+		ABZR87_RS08705	0.33	-2.6
1,850,423	+		ABZR87_RS08705	0.33	-0.3
1,850,423	+		ABZR87_RS08705	0.33	+0.2
1,850,423	+		ABZR87_RS08705	0.33	+0.2
1,850,423	+		ABZR87_RS08705	0.33	+0.6
1,850,423	+		ABZR87_RS08705	0.33	+3.5
1,850,423	+		ABZR87_RS08705	0.33	-0.2
1,850,423	+		ABZR87_RS08705	0.33	-0.6
1,850,424	-		ABZR87_RS08705	0.34	-0.3
1,850,424	-		ABZR87_RS08705	0.34	-0.1
1,850,424	-		ABZR87_RS08705	0.34	-0.2
1,850,424	-		ABZR87_RS08705	0.34	-1.0
1,850,424	-		ABZR87_RS08705	0.34	-0.2
1,850,424	-		ABZR87_RS08705	0.34	-1.4
1,850,424	-		ABZR87_RS08705	0.34	-1.6
1,850,424	-		ABZR87_RS08705	0.34	-2.0
1,850,424	-		ABZR87_RS08705	0.34	+0.4
1,850,435	+		ABZR87_RS08705	0.34	-1.4
1,850,476	+		ABZR87_RS08705	0.38	-1.6
1,850,476	+		ABZR87_RS08705	0.38	-0.9
1,850,476	+		ABZR87_RS08705	0.38	+1.0
1,850,476	+		ABZR87_RS08705	0.38	-1.4
1,850,476	+		ABZR87_RS08705	0.38	-0.6
1,850,477	-		ABZR87_RS08705	0.38	-2.8
1,850,477	-		ABZR87_RS08705	0.38	-0.7
1,850,477	-		ABZR87_RS08705	0.38	-1.7
1,850,477	-		ABZR87_RS08705	0.38	-1.9
1,850,477	-		ABZR87_RS08705	0.38	-2.0
1,850,482	+		ABZR87_RS08705	0.38	-2.1
1,850,482	+		ABZR87_RS08705	0.38	+1.4
1,850,482	+		ABZR87_RS08705	0.38	-2.6
1,850,482	+		ABZR87_RS08705	0.38	-0.5
1,850,483	-		ABZR87_RS08705	0.38	-1.4
1,850,518	+		ABZR87_RS08705	0.41	-0.5
1,850,519	-		ABZR87_RS08705	0.41	+0.5
1,850,519	-		ABZR87_RS08705	0.41	-0.3
1,850,536	+		ABZR87_RS08705	0.43	-2.3
1,850,536	+		ABZR87_RS08705	0.43	-2.1
1,850,536	+		ABZR87_RS08705	0.43	+0.3
1,850,536	+		ABZR87_RS08705	0.43	-1.4
1,850,537	-		ABZR87_RS08705	0.43	+0.6
1,850,537	-		ABZR87_RS08705	0.43	-2.2
1,850,537	-		ABZR87_RS08705	0.43	-2.6
1,850,603	+		ABZR87_RS08705	0.48	+0.3
1,850,603	+		ABZR87_RS08705	0.48	-1.2
1,850,603	+		ABZR87_RS08705	0.48	-0.9
1,850,603	+		ABZR87_RS08705	0.48	-0.9
1,850,603	+		ABZR87_RS08705	0.48	-2.1
1,850,603	+		ABZR87_RS08705	0.48	-0.2
1,850,604	-		ABZR87_RS08705	0.48	-0.7
1,850,604	-		ABZR87_RS08705	0.48	-0.7
1,850,604	-		ABZR87_RS08705	0.48	-2.0
1,850,604	-		ABZR87_RS08705	0.48	-2.2
1,850,604	-		ABZR87_RS08705	0.48	+1.2
1,850,699	+		ABZR87_RS08705	0.56	-2.7
1,850,699	+		ABZR87_RS08705	0.56	+0.1
1,850,700	-		ABZR87_RS08705	0.56	-0.5
1,850,700	-		ABZR87_RS08705	0.56	-1.1
1,850,881	+		ABZR87_RS08705	0.71	-1.6
1,850,881	+		ABZR87_RS08705	0.71	-1.4
1,850,881	+		ABZR87_RS08705	0.71	+0.6
1,850,882	-		ABZR87_RS08705	0.71	+0.5
1,850,882	-		ABZR87_RS08705	0.71	-0.8
1,850,882	-		ABZR87_RS08705	0.71	-1.0
1,850,882	-		ABZR87_RS08705	0.71	-0.3
1,850,882	-		ABZR87_RS08705	0.71	-1.7
1,850,885	+		ABZR87_RS08705	0.71	-1.3
1,850,885	+		ABZR87_RS08705	0.71	+3.0
1,850,885	+		ABZR87_RS08705	0.71	-2.6
1,850,885	+		ABZR87_RS08705	0.71	-0.5
1,850,885	+		ABZR87_RS08705	0.71	-1.5
1,850,885	+		ABZR87_RS08705	0.71	-1.4
1,850,885	+		ABZR87_RS08705	0.71	-1.8
1,850,885	+		ABZR87_RS08705	0.71	-2.2
1,850,885	+		ABZR87_RS08705	0.71	+0.6
1,850,885	+		ABZR87_RS08705	0.71	+1.6
1,850,885	+		ABZR87_RS08705	0.71	+0.9
1,850,885	+		ABZR87_RS08705	0.71	-1.0
1,850,885	+		ABZR87_RS08705	0.71	-2.6
1,850,885	+		ABZR87_RS08705	0.71	+0.8
1,850,885	+		ABZR87_RS08705	0.71	-2.9
1,850,886	-		ABZR87_RS08705	0.71	+0.6
1,850,886	-		ABZR87_RS08705	0.71	+1.8
1,850,886	-		ABZR87_RS08705	0.71	+0.8
1,850,886	-		ABZR87_RS08705	0.71	-2.6
1,850,886	-		ABZR87_RS08705	0.71	-0.4
1,850,886	-		ABZR87_RS08705	0.71	+0.8
1,850,886	-		ABZR87_RS08705	0.71	-0.4
1,850,886	-		ABZR87_RS08705	0.71	-0.5
1,850,886	-		ABZR87_RS08705	0.71	-1.3
1,850,886	-		ABZR87_RS08705	0.71	+0.8
1,850,890	+		ABZR87_RS08705	0.71	-1.8
1,850,891	-		ABZR87_RS08705	0.71	-1.6
1,850,891	-		ABZR87_RS08705	0.71	-0.9
1,850,927	+		ABZR87_RS08705	0.74	-0.2
1,850,928	-		ABZR87_RS08705	0.74	+0.3
1,850,928	-		ABZR87_RS08705	0.74	+2.0
1,850,928	-		ABZR87_RS08705	0.74	-0.8
1,850,973	+		ABZR87_RS08705	0.78	-2.2
1,850,973	+		ABZR87_RS08705	0.78	-0.1
1,850,973	+		ABZR87_RS08705	0.78	-2.1
1,850,973	+		ABZR87_RS08705	0.78	-1.8
1,850,973	+		ABZR87_RS08705	0.78	-3.1
1,850,973	+		ABZR87_RS08705	0.78	-0.7
1,850,973	+		ABZR87_RS08705	0.78	+0.4
1,850,973	+		ABZR87_RS08705	0.78	+0.6
1,850,973	+		ABZR87_RS08705	0.78	-1.6
1,850,973	+		ABZR87_RS08705	0.78	-0.9
1,850,973	+		ABZR87_RS08705	0.78	-1.4
1,850,973	+		ABZR87_RS08705	0.78	+0.5
1,850,973	+		ABZR87_RS08705	0.78	-3.3
1,850,973	+		ABZR87_RS08705	0.78	+0.1
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1,850,973	+		ABZR87_RS08705	0.78	-2.4
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1,850,983	+		ABZR87_RS08705	0.79	-2.3
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1,851,156	+				-2.3
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