Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS07685

Experiment: Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB
1,627,592	+		ABZR87_RS07675	0.12	-1.4
1,627,621	+		ABZR87_RS07675	0.17	-0.1
1,627,621	+		ABZR87_RS07675	0.17	-0.3
1,627,621	+		ABZR87_RS07675	0.17	-1.9
1,627,621	+		ABZR87_RS07675	0.17	-1.4
1,627,622	-		ABZR87_RS07675	0.17	+0.5
1,627,681	+		ABZR87_RS07675	0.25	-1.2
1,627,682	-		ABZR87_RS07675	0.25	-1.5
1,627,682	-		ABZR87_RS07675	0.25	+1.0
1,627,771	+		ABZR87_RS07675	0.38	-0.1
1,627,771	+		ABZR87_RS07675	0.38	-2.8
1,627,772	-		ABZR87_RS07675	0.38	-0.6
1,627,856	-		ABZR87_RS07675	0.51	-0.7
1,627,856	-		ABZR87_RS07675	0.51	-1.8
1,627,861	+		ABZR87_RS07675	0.51	+0.8
1,627,862	-		ABZR87_RS07675	0.51	-0.7
1,627,862	-		ABZR87_RS07675	0.51	-0.5
1,627,896	+		ABZR87_RS07675	0.56	-1.0
1,627,896	+		ABZR87_RS07675	0.56	+1.5
1,627,896	+		ABZR87_RS07675	0.56	-3.0
1,627,896	+		ABZR87_RS07675	0.56	-0.4
1,627,897	-		ABZR87_RS07675	0.56	+1.0
1,627,897	-		ABZR87_RS07675	0.56	-0.8
1,627,897	-		ABZR87_RS07675	0.56	-0.9
1,627,897	-		ABZR87_RS07675	0.56	+0.2
1,627,981	+		ABZR87_RS07675	0.69	-2.3
1,627,981	+		ABZR87_RS07675	0.69	+0.1
1,627,982	-		ABZR87_RS07675	0.69	+0.1
1,628,416	-		ABZR87_RS07680	0.61	-1.0
1,628,416	-		ABZR87_RS07680	0.61	-1.6
1,628,416	-		ABZR87_RS07680	0.61	-0.3
1,628,416	-		ABZR87_RS07680	0.61	+0.4
1,628,416	-		ABZR87_RS07680	0.61	-2.0
1,628,490	+		ABZR87_RS07680	0.84	-0.6
1,628,490	+		ABZR87_RS07680	0.84	-0.2
1,628,491	-		ABZR87_RS07680	0.84	-0.3
1,628,491	-		ABZR87_RS07680	0.84	+0.1
1,628,855	+		ABZR87_RS07685	0.43	-0.0
1,628,856	-		ABZR87_RS07685	0.43	-0.5
1,628,856	-		ABZR87_RS07685	0.43	-1.2
1,628,856	-		ABZR87_RS07685	0.43	+1.7
1,628,856	-		ABZR87_RS07685	0.43	+0.5
1,628,856	-		ABZR87_RS07685	0.43	-0.3
1,628,856	-		ABZR87_RS07685	0.43	-1.6
1,628,856	-		ABZR87_RS07685	0.43	+0.4
1,628,858	-		ABZR87_RS07685	0.44	-0.5
1,628,868	-		ABZR87_RS07685	0.45	-0.1
1,628,868	-		ABZR87_RS07685	0.45	+0.1
1,628,945	+		ABZR87_RS07685	0.56	-0.8
1,628,945	+		ABZR87_RS07685	0.56	+0.1
1,628,946	-		ABZR87_RS07685	0.56	+0.3
1,629,008	+		ABZR87_RS07685	0.64	-2.0
1,629,179	+		ABZR87_RS07685	0.88	-0.5
1,629,179	+		ABZR87_RS07685	0.88	-1.3
1,629,179	+		ABZR87_RS07685	0.88	-3.2
1,629,180	-		ABZR87_RS07685	0.88	-1.5
1,629,180	-		ABZR87_RS07685	0.88	+1.0
1,629,343	+				-0.1
1,629,343	+				-2.2
1,629,367	+				-0.6
1,629,367	+				-0.5
1,629,398	-		ABZR87_RS07690	0.12	+0.5
1,629,487	+		ABZR87_RS07690	0.21	-1.3
1,629,487	+		ABZR87_RS07690	0.21	-0.7
1,629,488	-		ABZR87_RS07690	0.21	+0.4
1,629,619	+		ABZR87_RS07690	0.33	-0.6
1,629,619	+		ABZR87_RS07690	0.33	-0.0
1,629,619	+		ABZR87_RS07690	0.33	+0.6
1,629,619	+		ABZR87_RS07690	0.33	-0.7
1,629,619	+		ABZR87_RS07690	0.33	-2.6
1,629,620	-		ABZR87_RS07690	0.33	+0.6
1,629,620	-		ABZR87_RS07690	0.33	+0.0
1,629,620	-		ABZR87_RS07690	0.33	-0.9
1,629,620	-		ABZR87_RS07690	0.33	+0.3
1,629,620	-		ABZR87_RS07690	0.33	-0.0
1,629,620	-		ABZR87_RS07690	0.33	+0.1
1,629,635	-		ABZR87_RS07690	0.35	-0.2
1,629,709	+		ABZR87_RS07690	0.42	-3.0
1,629,709	+		ABZR87_RS07690	0.42	+1.3
1,629,709	+		ABZR87_RS07690	0.42	+1.6
1,629,710	-		ABZR87_RS07690	0.42	-4.1
1,629,710	-		ABZR87_RS07690	0.42	+3.0
1,629,710	-		ABZR87_RS07690	0.42	-0.8
1,629,710	-		ABZR87_RS07690	0.42	-0.8
1,629,710	-		ABZR87_RS07690	0.42	-2.4
1,629,724	+		ABZR87_RS07690	0.43	+0.1
1,629,724	+		ABZR87_RS07690	0.43	+1.6
1,629,724	+		ABZR87_RS07690	0.43	-2.2
1,629,724	+		ABZR87_RS07690	0.43	-0.7
1,629,724	+		ABZR87_RS07690	0.43	-1.9
1,629,724	+		ABZR87_RS07690	0.43	-1.7
1,629,724	+		ABZR87_RS07690	0.43	+0.4
1,629,724	+		ABZR87_RS07690	0.43	+0.6
1,629,724	+		ABZR87_RS07690	0.43	-1.0
1,629,725	-		ABZR87_RS07690	0.43	-0.7
1,629,725	-		ABZR87_RS07690	0.43	+0.7
1,629,725	-		ABZR87_RS07690	0.43	-1.0
1,629,725	-		ABZR87_RS07690	0.43	+2.3
1,629,829	+		ABZR87_RS07690	0.53	-1.1
1,629,829	+		ABZR87_RS07690	0.53	-0.3
1,629,830	-		ABZR87_RS07690	0.53	-0.6
1,629,830	-		ABZR87_RS07690	0.53	-2.4
1,629,830	-		ABZR87_RS07690	0.53	+0.1
1,629,830	-		ABZR87_RS07690	0.53	-1.4
1,629,830	-		ABZR87_RS07690	0.53	-0.6
1,629,927	-		ABZR87_RS07690	0.62	-0.3
1,629,950	+		ABZR87_RS07690	0.64	-0.6
1,629,950	+		ABZR87_RS07690	0.64	+0.0
1,629,950	+		ABZR87_RS07690	0.64	-0.6
1,629,950	+		ABZR87_RS07690	0.64	-3.1
1,629,950	+		ABZR87_RS07690	0.64	-2.0
1,629,951	-		ABZR87_RS07690	0.64	-1.8
1,629,951	-		ABZR87_RS07690	0.64	-0.1
1,629,951	-		ABZR87_RS07690	0.64	-0.0
1,629,951	-		ABZR87_RS07690	0.64	-1.1
1,629,958	+		ABZR87_RS07690	0.65	-0.0
1,629,959	-		ABZR87_RS07690	0.65	-0.5
1,629,959	-		ABZR87_RS07690	0.65	-0.1
1,629,997	+		ABZR87_RS07690	0.69	-1.3
1,629,997	+		ABZR87_RS07690	0.69	-0.5
1,629,997	+		ABZR87_RS07690	0.69	+0.0
1,629,998	-		ABZR87_RS07690	0.69	-1.4
1,630,183	+		ABZR87_RS07690	0.86	+0.4
1,630,183	+		ABZR87_RS07690	0.86	-0.7
1,630,184	-		ABZR87_RS07690	0.86	-0.0
1,630,184	-		ABZR87_RS07690	0.86	+0.2
1,630,184	-		ABZR87_RS07690	0.86	-1.1
1,630,184	-		ABZR87_RS07690	0.86	+1.6