Experiment: Carbon source 2-Deoxy-D-Ribose 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS20810 and HSERO_RS20815 are separated by 37 nucleotides HSERO_RS20815 and HSERO_RS20820 are separated by 61 nucleotides HSERO_RS20820 and HSERO_RS20825 are separated by 1 nucleotides
HSERO_RS20810: HSERO_RS20810 - amidophosphoribosyltransferase, at 4,764,304 to 4,765,029
_RS20810
HSERO_RS20815: HSERO_RS20815 - tRNA methyltransferase, at 4,765,067 to 4,765,549
_RS20815
HSERO_RS20820: HSERO_RS20820 - ABC transporter ATP-binding protein, at 4,765,611 to 4,766,405
_RS20820
HSERO_RS20825: HSERO_RS20825 - ABC transporter permease, at 4,766,407 to 4,767,300
_RS20825
Position (kb) 4765
4766 Strain fitness (log2 ratio) -1
0
1 at 4764.189 kb on + strand at 4764.189 kb on + strand at 4764.353 kb on - strand at 4764.356 kb on - strand at 4764.487 kb on - strand, within HSERO_RS20810 at 4764.716 kb on + strand, within HSERO_RS20810 at 4764.873 kb on - strand, within HSERO_RS20810 at 4765.018 kb on + strand at 4765.026 kb on - strand at 4765.077 kb on - strand at 4765.240 kb on + strand, within HSERO_RS20815 at 4765.249 kb on + strand, within HSERO_RS20815 at 4765.259 kb on - strand, within HSERO_RS20815 at 4765.324 kb on + strand at 4765.346 kb on + strand, within HSERO_RS20815 at 4765.483 kb on + strand, within HSERO_RS20815 at 4765.515 kb on - strand at 4765.529 kb on + strand at 4765.685 kb on - strand at 4765.999 kb on + strand, within HSERO_RS20820 at 4766.262 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Carbon source 2-Deoxy-D-Ribose 5 mM remove 4,764,189 + -0.2 4,764,189 + -0.5 4,764,353 - +0.7 4,764,356 - -0.2 4,764,487 - HSERO_RS20810 0.25 -0.5 4,764,716 + HSERO_RS20810 0.57 +0.6 4,764,873 - HSERO_RS20810 0.78 -0.0 4,765,018 + -0.7 4,765,026 - -0.4 4,765,077 - +0.5 4,765,240 + HSERO_RS20815 0.36 +1.6 4,765,249 + HSERO_RS20815 0.38 +0.3 4,765,259 - HSERO_RS20815 0.40 -0.1 4,765,324 + +1.3 4,765,346 + HSERO_RS20815 0.58 +1.0 4,765,483 + HSERO_RS20815 0.86 +0.6 4,765,515 - +1.0 4,765,529 + +0.8 4,765,685 - +0.3 4,765,999 + HSERO_RS20820 0.49 +0.9 4,766,262 - +1.3
Or see this region's nucleotide sequence