Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS12585

Experiment: Carbon source 2-Deoxy-D-Ribose 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxy-D-Ribose 5 mM
2,870,124	+		HSERO_RS12580	0.72	+0.5
2,870,272	-		HSERO_RS12580	0.83	+0.3
2,870,292	+		HSERO_RS12580	0.84	+0.3
2,870,342	-		HSERO_RS12580	0.88	-0.1
2,870,405	+				-0.5
2,870,504	+				+0.3
2,870,719	-				+0.5
2,870,907	+		HSERO_RS12585	0.23	-0.1
2,870,915	-		HSERO_RS12585	0.24	-0.1
2,870,915	-		HSERO_RS12585	0.24	-0.0
2,870,957	-		HSERO_RS12585	0.27	+0.6
2,871,045	+		HSERO_RS12585	0.34	+0.2
2,871,230	-		HSERO_RS12585	0.48	+0.2
2,871,343	-		HSERO_RS12585	0.56	+0.4
2,871,437	-		HSERO_RS12585	0.63	+1.5
2,872,187	-		HSERO_RS12590	0.16	-0.4
2,872,226	+		HSERO_RS12590	0.18	-0.5
2,872,359	+		HSERO_RS12590	0.28	-0.4
2,872,565	+		HSERO_RS12590	0.43	-0.8
2,872,889	-		HSERO_RS12590	0.66	+0.0
2,872,891	+				-0.7