Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS10235

Experiment: Carbon source 2-Deoxy-D-Ribose 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxy-D-Ribose 5 mM
2,307,661	+		HSERO_RS10230	0.37	+2.8
2,307,755	+		HSERO_RS10230	0.46	+3.0
2,307,910	+		HSERO_RS10230	0.59	+2.6
2,307,956	+		HSERO_RS10230	0.63	+2.6
2,308,130	-		HSERO_RS10230	0.79	+2.4
2,308,157	-		HSERO_RS10230	0.81	+1.2
2,308,341	+				+2.5
2,308,867	+		HSERO_RS10235	0.28	-0.0
2,309,110	-		HSERO_RS10235	0.45	-0.1
2,309,333	-				-1.4
2,309,438	-				+0.1
2,309,455	+		HSERO_RS10235	0.70	-0.3
2,309,544	+		HSERO_RS10235	0.76	+0.1
2,309,902	+				-0.4
2,309,952	+				+0.1
2,309,957	+				-0.2
2,309,998	-				-0.2
2,310,079	-		HSERO_RS10240	0.10	-0.3
2,310,449	-		HSERO_RS10240	0.29	-0.5