Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS07675

Experiment: Carbon source 2-Deoxy-D-Ribose 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxy-D-Ribose 5 mM
1,754,224	+		HSERO_RS07670	0.39	+0.9
1,754,231	+		HSERO_RS07670	0.40	-0.2
1,754,299	-		HSERO_RS07670	0.45	+1.1
1,754,301	-		HSERO_RS07670	0.45	-0.2
1,754,334	+		HSERO_RS07670	0.47	+0.6
1,754,453	-		HSERO_RS07670	0.56	-0.4
1,754,726	-		HSERO_RS07670	0.75	-0.6
1,754,779	-		HSERO_RS07670	0.79	-0.5
1,754,793	-		HSERO_RS07670	0.80	-0.0
1,754,857	-		HSERO_RS07670	0.85	+0.1
1,754,967	+				+0.5
1,754,992	-				-0.2
1,755,139	-				+1.1
1,755,153	-				+0.7
1,755,316	+		HSERO_RS07675	0.26	+0.0
1,755,593	-		HSERO_RS07675	0.56	-0.2
1,755,825	-		HSERO_RS07675	0.82	+1.0
1,755,998	-				-0.3
1,756,293	-		HSERO_RS07680	0.27	-0.1
1,756,342	-		HSERO_RS07680	0.32	+0.2
1,756,512	+		HSERO_RS07680	0.49	+2.4
1,756,839	-		HSERO_RS07680	0.82	+0.4
1,756,839	-		HSERO_RS07680	0.82	+0.6
1,756,866	-		HSERO_RS07680	0.85	+0.9
1,756,951	-				-0.1
1,756,978	-				-0.6